Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_O01
         (415 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK027100-1|BAB15657.1|  363|Homo sapiens protein ( Homo sapiens ...    32   0.66 
X52679-1|CAA36902.1|  316|Homo sapiens acid sphingomyelinase (31...    31   1.5  
AK130475-1|BAC85362.1|  193|Homo sapiens protein ( Homo sapiens ...    29   8.1  

>AK027100-1|BAB15657.1|  363|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23447 fis, clone HSI03346. ).
          Length = 363

 Score = 32.3 bits (70), Expect = 0.66
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +2

Query: 8   RTSPSTADRTPTCPRSIYIYLS-NVHTRGVNKGVSTRIGTVPPSQCLDAWIYNKNDT*VI 184
           RT+ S    T +CP S+    S +  T    K   TR  +  PS    AW++NKN+  +I
Sbjct: 22  RTTSSRNSPTMSCPASVACEPSTSTTTSSPPKACLTRPSSPSPSCSTSAWLHNKNN--LI 79

Query: 185 GSGPR 199
              PR
Sbjct: 80  SKVPR 84


>X52679-1|CAA36902.1|  316|Homo sapiens acid sphingomyelinase (317
           AA) protein.
          Length = 316

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 65  YLSNVHTRGVNKGVSTRIGTVPPSQCLDAWIYN 163
           YLS+V T+   + V   IG +PP  CL +W +N
Sbjct: 94  YLSSVETQEGKRKVHI-IGHIPPGHCLKSWSWN 125


>AK130475-1|BAC85362.1|  193|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26965 fis, clone SLV01057. ).
          Length = 193

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
 Frame = -3

Query: 167 SCYISTRQDTGRAGP-SRCVWTPPC*PP--SCGRYLSKCKLNAGRSACGPQW 21
           SC ++T +  G + P    V  P    P  SC     K    AGRS C P W
Sbjct: 25  SCRVATEEGLGSSWPWLGWVLAPVLQAPLTSCKLRFLKVTFGAGRSGCRPSW 76


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,128,140
Number of Sequences: 237096
Number of extensions: 1246861
Number of successful extensions: 6099
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6099
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)