Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_N18
(567 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 35 0.007
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 34 0.017
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 32 0.067
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 30 0.21
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 30 0.21
SPCC24B10.03 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 30 0.27
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 29 0.36
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 29 0.36
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 29 0.48
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 28 0.83
SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 0.83
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr... 28 1.1
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 27 1.9
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 27 1.9
SPBC146.09c |lsd1|swm1, saf110|histone demethylase SWIRM1|Schizo... 27 1.9
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 27 1.9
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 27 2.5
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 27 2.5
SPAC13A11.03 |mcp7|mug32|meiosis specific coiled-coil protein Mc... 27 2.5
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 27 2.5
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 26 3.4
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 4.4
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 26 4.4
SPAC1805.17 |crm1|caf2, SPAC1B2.01|nuclear export receptor Crm1|... 25 5.9
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 25 5.9
SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomy... 25 5.9
SPCC1919.03c |||AMP-activated protein kinase beta subunit |Schiz... 25 7.7
SPBC19G7.14c |cog5||Golgi transport complex subunit Cog5 |Schizo... 25 7.7
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 25 7.7
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 35.1 bits (77), Expect = 0.007
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = -1
Query: 498 CKPTNADQCFEHKGENELS-EIKEKYYTLILANSK-IEQKNIDLEQLNRSLNVNIQDVQA 325
C + + E K +E + ++ +K +++ +N K E K I E+ +I ++Q
Sbjct: 263 CLVSKHNNALEDKFNSEAARQLLQKSLSIVASNLKQAENKTISYEEKLSIAQNSINEIQT 322
Query: 324 KNEKLKLSNEKIERRLDEALVSLRHLHSLEENTE 223
+N LKL EK++ D+ L SL+E E
Sbjct: 323 QNRDLKLETEKLQ---DQIKALLERNQSLQEALE 353
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 33.9 bits (74), Expect = 0.017
Identities = 11/46 (23%), Positives = 31/46 (67%)
Frame = -1
Query: 408 ANSKIEQKNIDLEQLNRSLNVNIQDVQAKNEKLKLSNEKIERRLDE 271
+NS++E++ ++L++ NR+++ + D ++K + N+ ++ +DE
Sbjct: 365 SNSQLEEEMVELKESNRTIHSQLTDAESKLSSFEQENKSLKGSIDE 410
Score = 33.5 bits (73), Expect = 0.022
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = -1
Query: 456 ENELSEIKEKYYTLILANSKIEQKNIDLEQLNRSLNVNIQDVQAKNEKLKLSNEKIERRL 277
E E+ E+KE T+ + E K EQ N+SL +I + Q +++ +L
Sbjct: 370 EEEMVELKESNRTIHSQLTDAESKLSSFEQENKSLKGSIDEYQNNLSSKDKMVKQVSSQL 429
Query: 276 DEALVSLRH 250
+EA SL H
Sbjct: 430 EEARSSLAH 438
Score = 30.3 bits (65), Expect = 0.21
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Frame = -1
Query: 450 ELSEIKEKYYTLILANSKIEQKNIDLEQLNRSLNVNIQDVQAKNEKLKLSNEKIERRLDE 271
E + ++K TL N+ + K + LE+ N+SL +DV + + ++ E + R+ +E
Sbjct: 645 ERANFEQKESTLSDENNDLRTKLLKLEESNKSLIKKQEDVDSLEKNIQTLKEDL-RKSEE 703
Query: 270 AL----VSLRHLHSLEENTE-----LEYLRNILYEYLTGSGTHSITLAKVL 145
AL + ++L + +N + LE RN L+ L+ + + L+ L
Sbjct: 704 ALRFSKLEAKNLREVIDNLKGKHETLEAQRNDLHSSLSDAKNTNAILSSEL 754
Score = 30.3 bits (65), Expect = 0.21
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 387 KNID-LEQLNRSLNVNIQDVQAKNEKLKLSNEKIERRLDEALVSLR 253
KN D LEQ + LN ++ ++A+ + L NE++ RLD+ L+
Sbjct: 892 KNYDSLEQESAQLNSGLKSLEAEKQLLHTENEELHIRLDKLTGKLK 937
Score = 25.8 bits (54), Expect = 4.4
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Frame = -1
Query: 465 HKGENELSEIKEKYYTLILANSKIEQKNIDLEQLNRSLNVNIQD---VQAKNEKLKLSNE 295
HK N+ S++ E L N K+ ++DL+ L SLNV I D + + +L + +
Sbjct: 843 HKHVNQESKVSE----LKEVNGKL---SLDLKNLRSSLNVAISDNDQILTQLAELSKNYD 895
Query: 294 KIERRLDEALVSLRHLHSLEE--NTELEYLRNILYEYLTG 181
+E+ + L+ L + ++ +TE E L +I + LTG
Sbjct: 896 SLEQESAQLNSGLKSLEAEKQLLHTENEEL-HIRLDKLTG 934
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 31.9 bits (69), Expect = 0.067
Identities = 21/78 (26%), Positives = 41/78 (52%)
Frame = -1
Query: 456 ENELSEIKEKYYTLILANSKIEQKNIDLEQLNRSLNVNIQDVQAKNEKLKLSNEKIERRL 277
ENELSEI KY ++ + ++ + L+ +SL D Q++ + E+ E
Sbjct: 341 ENELSEILPKYNAIVSEADDLNKRIMLLKNQKQSL----LDKQSRTSQFTTKKERDEWIR 396
Query: 276 DEALVSLRHLHSLEENTE 223
++ L R+++S +EN++
Sbjct: 397 NQLLQINRNINSTKENSD 414
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 30.3 bits (65), Expect = 0.21
Identities = 26/88 (29%), Positives = 44/88 (50%)
Frame = -1
Query: 462 KGENELSEIKEKYYTLILANSKIEQKNIDLEQLNRSLNVNIQDVQAKNEKLKLSNEKIER 283
+ E ++E++EK TL K + N L + L +Q +A +KL+ SNE+ +R
Sbjct: 1248 RNEEVITELREKIETL-----KTDLANFRLNK--EQLESQLQTEKAAVKKLENSNEEYKR 1300
Query: 282 RLDEALVSLRHLHSLEENTELEYLRNIL 199
E L+SL S +++ L+N L
Sbjct: 1301 HNQEILLSLN--SSTSTSSDASRLKNEL 1326
Score = 26.2 bits (55), Expect = 3.4
Identities = 15/80 (18%), Positives = 38/80 (47%)
Frame = -1
Query: 453 NELSEIKEKYYTLILANSKIEQKNIDLEQLNRSLNVNIQDVQAKNEKLKLSNEKIERRLD 274
N + E++++ ++ + A +QKN + L ++ D+Q+K+ L+ R ++
Sbjct: 885 NGVIELEKQRFSTLEAKFT-QQKNTSYSEREALLESSLSDLQSKHTSLESQYNYSLRNIE 943
Query: 273 EALVSLRHLHSLEENTELEY 214
+ + + + E + EY
Sbjct: 944 QLQAASKLAEEMVERVKTEY 963
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 30.3 bits (65), Expect = 0.21
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Frame = -1
Query: 507 QEYCKPTNA-DQCFEHKG-ENELSEIKEKYYTLI-LANSKIEQKNIDLEQLNRSLNVNIQ 337
QE T A + C E G EN +Y++ I +N+ I + ++LE LNR ++
Sbjct: 456 QENSHYTGAGNNCLELVGKENNCKNQYPQYFSNIDESNAFINNQCLELEALNRKNDLIRG 515
Query: 336 DVQAKNEKLKLSNEKIERRLDEALVSLRHLHSLEENTELEYLRNI 202
++ + EK ++ ++++ + V +H+ L ENT +N+
Sbjct: 516 ELDSLKEKNLVAQKQLKSANNTLHVRAKHIQIL-ENTNQSLKKNL 559
>SPCC24B10.03 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 128
Score = 29.9 bits (64), Expect = 0.27
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -1
Query: 366 LNRSLNVNIQDVQAKNEKLKLSNEKIERRL 277
L+ +N NI+D++ N L+L NE++E +L
Sbjct: 41 LDARMNRNIEDLEISNYNLRLMNEQLESQL 70
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 29.5 bits (63), Expect = 0.36
Identities = 28/129 (21%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Frame = -1
Query: 468 EHKGENELSEIKEKYYTLILANSKIEQKNIDLEQLNRSLNVNIQDVQAKNEKLKLSNEKI 289
+H + L + + Y L L S E + ++L + N QD+ + E LK +NE++
Sbjct: 227 DHLVDKVLFDYLVRTYHLYLDESPEESE--PEKELKATFNQQNQDLYNQTEALKSTNEEL 284
Query: 288 ERRLDEALVSLRHLHSLEENTELEYLRNILYE-YLTGSGTHSITLAKVLAAV-VKFDDKQ 115
++ A + LEE + ++ ++G + + ++ + V ++K+
Sbjct: 285 INQIKSAEELDSAIQVLEERYRTMQRDEVKFQSAMSGMKSKMESRTNLMKQLQVNIEEKE 344
Query: 114 TQMVLQKEK 88
+Q+ L KEK
Sbjct: 345 SQLQLLKEK 353
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 29.5 bits (63), Expect = 0.36
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = -1
Query: 390 QKNIDLEQLNRSLNVNIQDVQAKNEKLKLSNEKIERRLDEALVSLRHLHSLEENTELEYL 211
QKN +L+QL + + ++++NEKL + +K+ +E + L EN + + L
Sbjct: 674 QKNTELQQLLKQNESASELLKSRNEKLCVDYDKLRSVFEEDSSKILSLQKENENLQSQIL 733
Query: 210 R 208
+
Sbjct: 734 Q 734
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 29.1 bits (62), Expect = 0.48
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = -1
Query: 504 EYCKPTNADQCFEHKGENELSEI--KEKYYTLILANSKIEQKNIDLEQLNRSLNVN 343
E+C T D F E+ELS + E + + K E + +D+ L+ N
Sbjct: 1084 EFCDQTTMDSTFPEYSEDELSSVDKSELVSNISVLKKKTEDREVDINVLSEYRRCN 1139
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 28.3 bits (60), Expect = 0.83
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = -1
Query: 405 NSKIEQKNIDLEQLNRSLNVNIQDVQAKNEKLKLSNEKIERRLDEALV 262
++++E +IDL+ N S + + +A E + KIE+ + + +V
Sbjct: 6 DNEVELYSIDLKNRNESAKIKLAYAKALEESILCETRKIEQEIKDQVV 53
>SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 261
Score = 28.3 bits (60), Expect = 0.83
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = -1
Query: 477 QCFEHKGENELSEIKEKYYTLILANSKIEQKNIDLEQLNRSLNVNIQDVQAKNEKLKLSN 298
Q + + EN+L E+++K S++ ++ EQ+N L I D+++K ++LK N
Sbjct: 23 QNLKEETENQLKELEKK-------RSQLHKE----EQINLQLVYAINDLRSKTKELKAEN 71
Query: 297 EK 292
EK
Sbjct: 72 EK 73
>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1024
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/51 (23%), Positives = 29/51 (56%)
Frame = -1
Query: 435 KEKYYTLILANSKIEQKNIDLEQLNRSLNVNIQDVQAKNEKLKLSNEKIER 283
+EKY++++ + K E NI + R+ + +++ +EKL+ +++ R
Sbjct: 681 QEKYFSVLNSVVKAESSNITRLPIKRTFYGDTRNLDKASEKLRAEHDRTRR 731
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 369 QLNRSLNVNIQDVQAKNEKLKLSNEKIERRLDEALVS-LRHLHSLEENTELEYL 211
+L +S +QD + + ++LK E ERR D L + L++ + +EYL
Sbjct: 467 ELEKSRGSELQDAKRRLDELKAKAEDAERRNDFTLAADLKYYGIPDLQKRIEYL 520
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 27.1 bits (57), Expect = 1.9
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -1
Query: 420 TLILANSKIEQKNIDLEQLNRSLNVNIQDVQAKNEKLKLSNE 295
TL L S++E+KN + + + RSL + ++ KN L ++
Sbjct: 476 TLPLVISRLEEKNEEWKSVKRSLQPGWRSIEFKNYDKSLDSQ 517
>SPBC146.09c |lsd1|swm1, saf110|histone demethylase
SWIRM1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1000
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 501 YCKPTNADQCFEHKGENELSEIKEKYYTLILANSKIEQKNIDLEQ 367
Y NA Q +GE E E + Y+T L ++ QK +D EQ
Sbjct: 781 YGTKRNAQQALGKEGERENKEKRISYHTEYL---RLRQKRLDKEQ 822
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 27.1 bits (57), Expect = 1.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -1
Query: 417 LILANSKIEQKNIDLEQLNRSLNVNIQDVQAKNEKLKLSNEK 292
LI+AN K K D E LN +V+ ++ + K+KL E+
Sbjct: 165 LIIANLKKALKEKDAEVLNLQSHVSSKESELDRFKIKLETEE 206
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 2.5
Identities = 11/51 (21%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Frame = -1
Query: 417 LILANSKIEQKNIDLEQLNRS---LNVNIQDVQAKNEKLKLSNEKIERRLD 274
L+ N+K+E+ NI +++LN + L+ +++ + + L N++++ +++
Sbjct: 487 LLQLNAKLEKANIVIDELNSAKLKLSKQVEEESSMKDDLTEMNQRLKEQIE 537
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 26.6 bits (56), Expect = 2.5
Identities = 17/80 (21%), Positives = 42/80 (52%)
Frame = -1
Query: 456 ENELSEIKEKYYTLILANSKIEQKNIDLEQLNRSLNVNIQDVQAKNEKLKLSNEKIERRL 277
+ L ++++ + I + + + ++ +LEQ L N+Q+ + +LKL EK +++
Sbjct: 520 QRRLRMVEDELHEAINSKNVQQSRSEELEQQISKLTDNLQEYRNTVRELKLDLEKSKKKN 579
Query: 276 DEALVSLRHLHSLEENTELE 217
++ +S + +EE L+
Sbjct: 580 ED--LSKLEVEKVEEIANLK 597
>SPAC13A11.03 |mcp7|mug32|meiosis specific coiled-coil protein
Mcp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 26.6 bits (56), Expect = 2.5
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -1
Query: 462 KGENELSEIKEKYYTLILANSKIEQKNIDLEQLNRSLNVNIQDVQAKNEKLK 307
K +NE +E YTL L ++K + + QL+ + N + + KNE K
Sbjct: 111 KRDNEGTENDANQYTLELLHAKESELKLLKTQLSNLNHCNPETFELKNENTK 162
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 26.6 bits (56), Expect = 2.5
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = -1
Query: 456 ENELSEIKEKYYTLILANSKIEQKNIDLEQLNRSLNVNIQDVQ-AKNEKLKLSNEKIERR 280
+N++ K KY L +++ Q+++DL + + + Q A ++K K+ E +
Sbjct: 471 KNQILTWKNKYEALAKLYTQLRQEHLDLLSKYKQIQLKASSAQEAIDKKEKMEREMKNKN 530
Query: 279 LDEALVSL---RHLHSLE 235
L+ A + L R H LE
Sbjct: 531 LELADMILERDRARHELE 548
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 26.2 bits (55), Expect = 3.4
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 417 LILANSKIEQKNIDLEQLNRSLNVNIQDVQAKNEKLKLSNEKIERRLDE 271
L L N ++ +NIDL +L ++ VQ +NE+ K + R E
Sbjct: 38 LQLENERLLSENIDLRTTAINLEEQLETVQNENEENKTKLAALLNRFHE 86
>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 230
Score = 25.8 bits (54), Expect = 4.4
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 313 FFVFGLYILDVNIQ*SVQLFQINVFLFYFAISQY*CVIFFFNFRQLIF-PFVF 468
FF F L+ L + S F +F+ YF+ +FFF +F F+F
Sbjct: 119 FFFFLLFFLSFSFSFSFLFFLSQIFIVYFSSFPILHFLFFFFLCVCVFLSFLF 171
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.8 bits (54), Expect = 4.4
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = -1
Query: 402 SKIEQKNIDLEQLNRSLNVNIQDVQAKNEKLKLSNEKIERRLDEALVSLRHLHSLEENTE 223
SK E K DL + N +Q +NE L + + L++ ++R + + N
Sbjct: 789 SKFESKQQDLIANIGKIVSNF--LQEQNESLYTKADILHSHLNDTNSNIRKANEIMNNRS 846
Query: 222 LEYLRN 205
E+LRN
Sbjct: 847 EEFLRN 852
>SPAC1805.17 |crm1|caf2, SPAC1B2.01|nuclear export receptor
Crm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1078
Score = 25.4 bits (53), Expect = 5.9
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -1
Query: 324 KNEKLKLSNEKIERRLDEALVSLRHLHSLEENTELEYLRNI 202
K E LKL + I R D LV + +L E L+YL+N+
Sbjct: 753 KKEILKLVDAYISRAEDLELVGNTLIPALFEAVLLDYLQNV 793
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 25.4 bits (53), Expect = 5.9
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = -1
Query: 447 LSEIKEKYYTLILANSKIEQKNIDLEQLNRSLNVNIQDVQAKNEKLKLSN 298
+ EI E I K+ +KN +L + +L IQD + + L N
Sbjct: 1142 IKEISEMLEQSIATEEKLRRKNSELCDIIEALKYQIQDQETEIISLNADN 1191
>SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 25.4 bits (53), Expect = 5.9
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Frame = -1
Query: 360 RSLNVNIQDVQAKNEKLKLSNEKIERRLDEA--LVSLRH------LHSLEENTELEYLRN 205
RSLN+ I D + +++ S + + +D + L + H L SL N E EYL++
Sbjct: 4 RSLNLFIIDKKHQHKSSLSSFQNCKLGIDASFYLTQIIHSFTPQELQSLAVNGESEYLQH 63
Query: 204 ILYEYLTGSGTHSIT 160
+ E+L T +IT
Sbjct: 64 RISEFLEQLRTENIT 78
>SPCC1919.03c |||AMP-activated protein kinase beta subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 298
Score = 25.0 bits (52), Expect = 7.7
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -1
Query: 303 SNEKIERRLDEALVSLRHLHSLEENTELEYLRNILYEYLTGSGTHSITLAK 151
+NEK+ +DE L + +EE +E E + +LT + + L K
Sbjct: 178 ANEKLGASIDERLSQVHTDLPMEEKSESEQYSTEIPAFLTSNTLQELKLPK 228
>SPBC19G7.14c |cog5||Golgi transport complex subunit Cog5
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 411
Score = 25.0 bits (52), Expect = 7.7
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = -1
Query: 447 LSEIKEKYYTLILANSKIEQKNIDLEQLNRSLNVN--IQDVQAKNEKLKLSNEKIERRLD 274
L E++ + LI+ KN+ + SLN +QD++ K E+L L E+I +
Sbjct: 49 LKEVERQITDLIVHEETTLTKNV-----SSSLNAQSYLQDIEGKLEQLMLVYERIRSLVV 103
Query: 273 EALVSLRHLHSLEENTELEYL 211
+L LH N Y+
Sbjct: 104 IPSENLGPLHEAIVNLHSTYM 124
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 25.0 bits (52), Expect = 7.7
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 324 KNEKLKLSNEKIERRLDEALVSLRHLHSLEENTELEYLRNILYEY 190
KN+K +LS E IER + EA L+E E RN L Y
Sbjct: 532 KNDKGRLSEEDIERMVKEAEEFAEEDKILKERIE---ARNTLENY 573
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,038,816
Number of Sequences: 5004
Number of extensions: 38469
Number of successful extensions: 172
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 240047038
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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