Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_N17
         (679 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-452|AAF59229.2|  180|Drosophila melanogaster CG30498-PA...   174   8e-44
AY069840-1|AAL39985.1|  180|Drosophila melanogaster SD08653p pro...   174   1e-43
AF225958-1|AAF35374.1| 1215|Drosophila melanogaster unknown prot...    29   5.8  

>AE013599-452|AAF59229.2|  180|Drosophila melanogaster CG30498-PA
           protein.
          Length = 180

 Score =  174 bits (424), Expect = 8e-44
 Identities = 83/150 (55%), Positives = 110/150 (73%), Gaps = 3/150 (2%)
 Frame = -2

Query: 534 VKTVLIALILWIS-LCSAKK--AAQKPDWAKKDIRDFSDADMERLLDQWXXXXXXXXXXX 364
           ++T L+ L+L ++ L  AKK    +KP WAKKDIRD+S+AD+ERLLDQW           
Sbjct: 1   MQTRLVLLLLALTPLVLAKKFKEEEKPAWAKKDIRDYSEADLERLLDQWEEDEEPLEDDE 60

Query: 363 XXEHLRKPPALDLTKMDMSNPEAVLQATKKGQTLMMFVSVANKPSRARTEEITKIWQTSL 184
             EHLR  P LDL+ +D  +PE +L+ +KKG+TLM FVSV   P+R  ++ ITK+WQTSL
Sbjct: 61  LPEHLRPQPKLDLSNLDSKSPEDLLKVSKKGRTLMTFVSVTGNPTREESDTITKLWQTSL 120

Query: 183 WSNHIQAERYLIDDDRAIFMFKDGSQAWTA 94
           W+NHIQAERY++DD+RAIF+FKDG+QAW A
Sbjct: 121 WNNHIQAERYMVDDNRAIFLFKDGTQAWDA 150


>AY069840-1|AAL39985.1|  180|Drosophila melanogaster SD08653p
           protein.
          Length = 180

 Score =  174 bits (423), Expect = 1e-43
 Identities = 81/147 (55%), Positives = 105/147 (71%), Gaps = 1/147 (0%)
 Frame = -2

Query: 531 KTVLIALILW-ISLCSAKKAAQKPDWAKKDIRDFSDADMERLLDQWXXXXXXXXXXXXXE 355
           + VL+ L L  + L    K  +KP WAKKDIRD+S+AD+ERLLDQW             E
Sbjct: 4   RLVLLLLALTPVVLAKKFKEEEKPAWAKKDIRDYSEADLERLLDQWEEDEEPLEDDELPE 63

Query: 354 HLRKPPALDLTKMDMSNPEAVLQATKKGQTLMMFVSVANKPSRARTEEITKIWQTSLWSN 175
           HLR  P LDL+ +D  +PE +L+ +KKG+TLM FVSV   P+R  ++ ITK+WQTSLW+N
Sbjct: 64  HLRPQPKLDLSNLDSKSPEDLLKVSKKGRTLMTFVSVTGNPTREESDTITKLWQTSLWNN 123

Query: 174 HIQAERYLIDDDRAIFMFKDGSQAWTA 94
           HIQAERY++DD+RAIF+FKDG+QAW A
Sbjct: 124 HIQAERYMVDDNRAIFLFKDGTQAWDA 150


>AF225958-1|AAF35374.1| 1215|Drosophila melanogaster unknown protein.
          Length = 1215

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 198  WQTSLWSNHIQAERYLIDDDRAIFMFKDGSQAW 100
            W+  LWS H+QA R++  D+   FM   G  A+
Sbjct: 1137 WRRRLWSEHVQAGRFINWDE---FMLMGGLSAY 1166


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,203,678
Number of Sequences: 53049
Number of extensions: 454507
Number of successful extensions: 1147
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)