Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_N09
         (361 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0321 - 16359390-16359539,16359674-16359746,16360448-163608...    27   5.9  
10_07_0133 + 13274190-13274317,13274533-13276371,13277064-132772...    26   7.7  

>11_04_0321 -
           16359390-16359539,16359674-16359746,16360448-16360845,
           16360919-16362673,16362751-16362861,16363745-16363962,
           16364088-16364196
          Length = 937

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 97  QNAIGMLKYYNINKLCIKFIEDTQLTKTTTCYIA 198
           Q A G ++  +  +LCIK  +D QL K + C++A
Sbjct: 578 QYANGTVEGLSEQELCIKCGKDGQLLKCSGCFLA 611


>10_07_0133 +
           13274190-13274317,13274533-13276371,13277064-13277253,
           13277442-13277657
          Length = 790

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 9/34 (26%), Positives = 22/34 (64%)
 Frame = +1

Query: 175 KTTTCYIASLFK*RPLIFRTFIIQISNKVNNVIL 276
           +T+TC+   + + R LIF   +  +++K +N+++
Sbjct: 552 ETSTCFEQKMHQIRALIFHVSLTSLASKESNLVI 585


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,756,390
Number of Sequences: 37544
Number of extensions: 88415
Number of successful extensions: 200
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 554421256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)