Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_N08
         (358 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   5.8  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   5.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   5.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   5.8  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   5.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    20   7.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   7.6  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -2

Query: 333 FTLLSGCGIQENFNLFLRIKVNKNINKMSAWRQAGLTY 220
           FT+ +G G+ E+  + L+ +VN  +  +      GLTY
Sbjct: 42  FTMQTGFGMLESGCVSLKNEVNIMMKNVVDIVLGGLTY 79


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 279 IKVNKNINKMSAWRQAGLTY 220
           + VNK+ NK + W++    Y
Sbjct: 690 VSVNKSWNKWNDWQETQNNY 709


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 279 IKVNKNINKMSAWRQAGLTY 220
           + VNK+ NK + W++    Y
Sbjct: 690 VSVNKSWNKWNDWQETQNNY 709


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 279 IKVNKNINKMSAWRQAGLTY 220
           + VNK+ NK + W++    Y
Sbjct: 690 VSVNKSWNKWNDWQETQNNY 709


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 16/69 (23%), Positives = 28/69 (40%)
 Frame = -2

Query: 330 TLLSGCGIQENFNLFLRIKVNKNINKMSAWRQAGLTYINYSNIAAKVLRRSLKQEFRAEA 151
           TLLS   I E   +  + ++      +  W+   L Y  +  I+  +    + +EF    
Sbjct: 236 TLLSETDIWEVEQILAKKEIKGVPTYLIKWKNWDLKYNTWEPISNLINCSDILEEFERNR 295

Query: 150 LKRDESHVR 124
           L+  ES  R
Sbjct: 296 LQLLESFKR 304


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 58  IPSSLWNSFLEVCRS 102
           I  SL   FL+VCRS
Sbjct: 334 IRESLDTQFLQVCRS 348


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 344 RPMISLYSLAVEFRKISIY 288
           RP+  + +L V   ++SIY
Sbjct: 18  RPLARMLALLVSLHRLSIY 36


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,290
Number of Sequences: 438
Number of extensions: 1441
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8308335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)