Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_N05
         (826 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0689 + 22160627-22160720,22161331-22161425,22161679-221618...    29   5.9  

>12_02_0689 +
           22160627-22160720,22161331-22161425,22161679-22161822,
           22162256-22162513,22162595-22162666,22162759-22162824,
           22163212-22163346,22163562-22163697,22163807-22163983,
           22164086-22164192,22164281-22164421,22164604-22164740,
           22164823-22165076,22165158-22165300,22165423-22165581,
           22166049-22166461,22167369-22167474
          Length = 878

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +3

Query: 624 FSHKFKTFEFYCTLSLSHAYKKASEINKPLRNSILEFDLKGN 749
           F H  K   FY   + + +Y K  E N+ L N I   DLKGN
Sbjct: 296 FYHVVKGKHFYTLSNAASSYHKVLEENRKLYNQIQ--DLKGN 335


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,226,996
Number of Sequences: 37544
Number of extensions: 349179
Number of successful extensions: 648
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)