Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_N05
         (826 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   2.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   2.0  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   3.4  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   6.0  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    22   6.0  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -2

Query: 318 QMSHIGTLVFRLLFKAKSLNHVFRRIIQKNF 226
           +M H   ++FRLL+ AK+ +  +   +   F
Sbjct: 101 EMRHQAVVLFRLLYSAKTFDVFYNTAVWARF 131


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -2

Query: 318 QMSHIGTLVFRLLFKAKSLNHVFRRIIQKNF 226
           +M H   ++FRLL+ AK+ +  +   +   F
Sbjct: 101 EMRHQAVVLFRLLYSAKTFDVFYNTAVWARF 131


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -3

Query: 545 FTVVSQQKLHV*AAEEKNAVNNGSAICHVIRVGGILENP 429
           FT+    K+H+      +A +  S I  +I +G   +NP
Sbjct: 324 FTMPLLDKMHIDDPVGASATHGASGIWGIIAIGLFADNP 362


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 245 RLKTWFRDLALKRSLKTRVPICDICKK 325
           +L TW      ++ L  R+  CD+ KK
Sbjct: 112 KLDTWVPHELKEKHLTQRINSCDLLKK 138


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -3

Query: 575 DPRSNRNRVLF 543
           DPRSNR  VLF
Sbjct: 41  DPRSNRGPVLF 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,048
Number of Sequences: 438
Number of extensions: 4415
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)