Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_N04
(374 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 26 0.17
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 1.6
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 1.6
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 1.6
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 23 1.6
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 6.3
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 6.3
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 6.3
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 20 8.3
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 20 8.3
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 20 8.3
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 20 8.3
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 25.8 bits (54), Expect = 0.17
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 196 CPAGTMNPWRL-FINLFRMKLKNSCYARSLK 107
CP GT NP L +N F++ L+NS R +K
Sbjct: 91 CPKGTKNPGTLATVNAFKL-LRNSMGKRRVK 120
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 22.6 bits (46), Expect = 1.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 210 GSPLSTPAGCESELGFGHYEAS 275
GS + TP EL GHY++S
Sbjct: 752 GSIVGTPVHMAPELLSGHYDSS 773
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 22.6 bits (46), Expect = 1.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 210 GSPLSTPAGCESELGFGHYEAS 275
GS + TP EL GHY++S
Sbjct: 790 GSIVGTPVHMAPELLSGHYDSS 811
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.6 bits (46), Expect = 1.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 111 LSRHHRNRNTDKMPFNHYIIFS*SLKCI 28
L+ HHRN +T +M ++F L CI
Sbjct: 316 LNYHHRNADTHEMSEWVKVVFLYWLPCI 343
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 22.6 bits (46), Expect = 1.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 135 KTPAMPEALSRHHRNRNTDK 76
KT A+P L+RH+R +K
Sbjct: 99 KTFAVPARLTRHYRTHTGEK 118
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 20.6 bits (41), Expect = 6.3
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +3
Query: 144 ILNKFINRRQGFIVPA----GHSAGDGSPLSTPAGCESELGF 257
++ K++N + F + GH AG+ S +S E+GF
Sbjct: 192 LVEKWVNSSEIFYTTSQQYYGHFAGNFSSISITFKLAREMGF 233
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 20.6 bits (41), Expect = 6.3
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = -3
Query: 267 HNGRSPTHFHIQLGWKE 217
H+G+S +H H W +
Sbjct: 397 HSGQSSSHHHGSKSWTQ 413
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.6 bits (41), Expect = 6.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 157 NLFRMKLKNSCYARS 113
N++++ LKN Y RS
Sbjct: 674 NMYKLDLKNMKYTRS 688
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 20.2 bits (40), Expect = 8.3
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3
Query: 111 LSRHHRNRNTDKM 73
LS H N N+DKM
Sbjct: 224 LSSHTLNHNSDKM 236
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 20.2 bits (40), Expect = 8.3
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -2
Query: 253 PNSLSHPAGVERGLPSPALCPAGTMNP 173
P LS P G +G P L + NP
Sbjct: 622 PARLSLPKGQPQGFPLQFLVVISSSNP 648
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 20.2 bits (40), Expect = 8.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 299 ICTFLAEVVL*VTSKQLLIG 358
+C F+A VV V+ +L+G
Sbjct: 177 LCVFVAGVVFIVSGLLMLVG 196
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 20.2 bits (40), Expect = 8.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 215 AAIAGTVSCRNDESLA 168
AA AG SCR SLA
Sbjct: 140 AATAGDKSCRYTASLA 155
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,969
Number of Sequences: 438
Number of extensions: 2278
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 9052365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -