Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_N03
         (815 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070970-1|AAL48592.1|  128|Drosophila melanogaster RE06926p pro...    71   2e-12
AJ271141-1|CAB70602.1|  128|Drosophila melanogaster histone-fold...    71   2e-12
AE014134-1512|AAO41168.1|  128|Drosophila melanogaster CG13399-P...    71   2e-12
AE014134-1511|AAF52677.1|  128|Drosophila melanogaster CG13399-P...    71   2e-12
AY094930-1|AAM11283.1|  156|Drosophila melanogaster RH50436p pro...    48   2e-05
AY070968-1|AAL48590.1|  156|Drosophila melanogaster RE06807p pro...    48   2e-05
AE014134-3154|AAF53839.2|  156|Drosophila melanogaster CG10447-P...    48   2e-05

>AY070970-1|AAL48592.1|  128|Drosophila melanogaster RE06926p
           protein.
          Length = 128

 Score = 70.9 bits (166), Expect = 2e-12
 Identities = 30/72 (41%), Positives = 49/72 (68%)
 Frame = -3

Query: 813 EALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDVIDAMKDIEFDR 634
           EALP   S+SKEAR  +A+AASVF ++VTS++T +   +  K +T +D++  + +++F+ 
Sbjct: 21  EALPESASVSKEARAAIARAASVFAIFVTSSSTALAHKQNHKTITAKDILQTLTELDFES 80

Query: 633 FVEPLGEALEHY 598
           FV  L + LE Y
Sbjct: 81  FVPSLTQDLEVY 92


>AJ271141-1|CAB70602.1|  128|Drosophila melanogaster histone-fold
           protein CHRAC subunit protein.
          Length = 128

 Score = 70.9 bits (166), Expect = 2e-12
 Identities = 30/72 (41%), Positives = 49/72 (68%)
 Frame = -3

Query: 813 EALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDVIDAMKDIEFDR 634
           EALP   S+SKEAR  +A+AASVF ++VTS++T +   +  K +T +D++  + +++F+ 
Sbjct: 21  EALPESASVSKEARAAIARAASVFAIFVTSSSTALAHKQNHKTITAKDILQTLTELDFES 80

Query: 633 FVEPLGEALEHY 598
           FV  L + LE Y
Sbjct: 81  FVPSLTQDLEVY 92


>AE014134-1512|AAO41168.1|  128|Drosophila melanogaster CG13399-PB,
           isoform B protein.
          Length = 128

 Score = 70.9 bits (166), Expect = 2e-12
 Identities = 30/72 (41%), Positives = 49/72 (68%)
 Frame = -3

Query: 813 EALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDVIDAMKDIEFDR 634
           EALP   S+SKEAR  +A+AASVF ++VTS++T +   +  K +T +D++  + +++F+ 
Sbjct: 21  EALPESASVSKEARAAIARAASVFAIFVTSSSTALAHKQNHKTITAKDILQTLTELDFES 80

Query: 633 FVEPLGEALEHY 598
           FV  L + LE Y
Sbjct: 81  FVPSLTQDLEVY 92


>AE014134-1511|AAF52677.1|  128|Drosophila melanogaster CG13399-PA,
           isoform A protein.
          Length = 128

 Score = 70.9 bits (166), Expect = 2e-12
 Identities = 30/72 (41%), Positives = 49/72 (68%)
 Frame = -3

Query: 813 EALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDVIDAMKDIEFDR 634
           EALP   S+SKEAR  +A+AASVF ++VTS++T +   +  K +T +D++  + +++F+ 
Sbjct: 21  EALPESASVSKEARAAIARAASVFAIFVTSSSTALAHKQNHKTITAKDILQTLTELDFES 80

Query: 633 FVEPLGEALEHY 598
           FV  L + LE Y
Sbjct: 81  FVPSLTQDLEVY 92


>AY094930-1|AAM11283.1|  156|Drosophila melanogaster RH50436p
           protein.
          Length = 156

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 22/70 (31%), Positives = 39/70 (55%)
 Frame = -3

Query: 807 LPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDVIDAMKDIEFDRFV 628
           +P    I+K+AR  + +  S F+ +++S A      + RK + G D++ A  ++ FD +V
Sbjct: 56  VPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGFDNYV 115

Query: 627 EPLGEALEHY 598
           EPL   L+ Y
Sbjct: 116 EPLSIYLQKY 125


>AY070968-1|AAL48590.1|  156|Drosophila melanogaster RE06807p
           protein.
          Length = 156

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 22/70 (31%), Positives = 39/70 (55%)
 Frame = -3

Query: 807 LPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDVIDAMKDIEFDRFV 628
           +P    I+K+AR  + +  S F+ +++S A      + RK + G D++ A  ++ FD +V
Sbjct: 56  VPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGFDNYV 115

Query: 627 EPLGEALEHY 598
           EPL   L+ Y
Sbjct: 116 EPLSIYLQKY 125


>AE014134-3154|AAF53839.2|  156|Drosophila melanogaster CG10447-PA
           protein.
          Length = 156

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 22/70 (31%), Positives = 39/70 (55%)
 Frame = -3

Query: 807 LPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDVIDAMKDIEFDRFV 628
           +P    I+K+AR  + +  S F+ +++S A      + RK + G D++ A  ++ FD +V
Sbjct: 56  VPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGFDNYV 115

Query: 627 EPLGEALEHY 598
           EPL   L+ Y
Sbjct: 116 EPLSIYLQKY 125


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,960,822
Number of Sequences: 53049
Number of extensions: 487898
Number of successful extensions: 875
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)