Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_M17
(503 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 24 1.0
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 1.4
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 1.4
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 1.4
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 1.4
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 1.4
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 1.4
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 1.4
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 1.4
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 23 1.8
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 23 1.8
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 23 2.4
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 2.4
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 2.4
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 7.3
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 7.3
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 7.3
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.8 bits (49), Expect = 1.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 301 FFFLKARSALIYFVC*AL*TILIKMLCI 218
F+ + R L Y V L T+LI LC+
Sbjct: 225 FYIIIRRKTLFYTVNLILPTVLISFLCV 252
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 49 YNY*SYTQYPHNNLYDD 99
YNY +Y Y +NN Y++
Sbjct: 89 YNYSNYNNYNNNNNYNN 105
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.4 bits (48), Expect = 1.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 49 YNY*SYTQYPHNNLYDD 99
YNY +Y Y +NN Y++
Sbjct: 89 YNYSNYNNYNNNNNYNN 105
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 49 YNY*SYTQYPHNNLYDD 99
YNY +Y Y +NN Y++
Sbjct: 89 YNYSNYNNYNNNNNYNN 105
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 49 YNY*SYTQYPHNNLYDD 99
YNY +Y Y +NN Y++
Sbjct: 89 YNYSNYNNYNNNNNYNN 105
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 49 YNY*SYTQYPHNNLYDD 99
YNY +Y Y +NN Y++
Sbjct: 89 YNYSNYNNYNNNNNYNN 105
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 49 YNY*SYTQYPHNNLYDD 99
YNY +Y Y +NN Y++
Sbjct: 89 YNYSNYNNYNNNNNYNN 105
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 49 YNY*SYTQYPHNNLYDD 99
YNY +Y Y +NN Y++
Sbjct: 89 YNYSNYNNYNNNNNYNN 105
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 49 YNY*SYTQYPHNNLYDD 99
YNY +Y Y +NN Y++
Sbjct: 89 YNYSNYNNYNNNNNYNN 105
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 23.0 bits (47), Expect = 1.8
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -2
Query: 460 KTMNHLAVYLLRI*YF*NDCGMFIIIFLYERFHYKLCLILVVSSKAVL 317
K M H AV L R+ Y +F ++ RF+ + L S AV+
Sbjct: 100 KEMRHQAVVLFRLLYSAKTFDVFYNTAVWARFNVNEQMYLYALSVAVI 147
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 23.0 bits (47), Expect = 1.8
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -2
Query: 460 KTMNHLAVYLLRI*YF*NDCGMFIIIFLYERFHYKLCLILVVSSKAVL 317
K M H AV L R+ Y +F ++ RF+ + L S AV+
Sbjct: 100 KEMRHQAVVLFRLLYSAKTFDVFYNTAVWARFNVNEQMYLYALSVAVI 147
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 22.6 bits (46), Expect = 2.4
Identities = 7/26 (26%), Positives = 17/26 (65%)
Frame = -2
Query: 370 RFHYKLCLILVVSSKAVLIKRECFFF 293
RF++ LC++L++ + +++ FF
Sbjct: 88 RFYWDLCMLLLLVANLIILPVAISFF 113
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.6 bits (46), Expect = 2.4
Identities = 7/26 (26%), Positives = 17/26 (65%)
Frame = -2
Query: 370 RFHYKLCLILVVSSKAVLIKRECFFF 293
RF++ LC++L++ + +++ FF
Sbjct: 88 RFYWDLCMLLLLVANLIILPVAISFF 113
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.6 bits (46), Expect = 2.4
Identities = 7/26 (26%), Positives = 17/26 (65%)
Frame = -2
Query: 370 RFHYKLCLILVVSSKAVLIKRECFFF 293
RF++ LC++L++ + +++ FF
Sbjct: 88 RFYWDLCMLLLLVANLIILPVAISFF 113
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 58 NNYNNTLFWYIIGV 17
NNYN L++ II +
Sbjct: 106 NNYNKKLYYNIINI 119
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 58 NNYNNTLFWYIIGV 17
NNYN L++ II +
Sbjct: 106 NNYNKKLYYNIINI 119
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 58 NNYNNTLFWYIIGV 17
NNYN L++ II +
Sbjct: 326 NNYNKKLYYNIINI 339
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,234
Number of Sequences: 438
Number of extensions: 2759
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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