Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_M14
         (315 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    25   0.29 
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   4.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   4.7  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           20   6.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   6.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    20   8.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   8.1  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 24.6 bits (51), Expect = 0.29
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 92  LDVLTMLVFQMGRWSLMCTLYRLYRLS 172
           + VLT++ F M R+  +C   R+Y +S
Sbjct: 127 VSVLTIVAFSMERYLAICHPLRVYTIS 153


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +1

Query: 64  EYLSSGEKRAGCADNVGFPNGSMVANVYSLSPLSF 168
           E +++GE        +G   GS+ A+  +L+ L F
Sbjct: 752 ELVTAGELFGRSGYGIGLQKGSLWADAVTLAILDF 786


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 310 ELKDTKTLNSKHEELLDYLLT 248
           + +DT+TLN KH      +LT
Sbjct: 57  DAEDTQTLNLKHLRAAVLVLT 77


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 313 NELKDTKTLNSKHEEL 266
           + L++ KTL S H+EL
Sbjct: 46  SSLRNYKTLISSHDEL 61


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 9/22 (40%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = -3

Query: 310 ELKDTKTLNSKH-EELLDYLLT 248
           ++ D +TLN+ H E+LL + +T
Sbjct: 391 KIPDLRTLNTLHSEKLLAFKMT 412


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +1

Query: 97  CADNVGFPNGSMVANV 144
           C DN+G P  S    V
Sbjct: 15  CCDNLGGPGSSSAGGV 30


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 95  PARFSPEDKYSRHRIIIKK 39
           P +  P D Y  H+I  KK
Sbjct: 255 PIKSEPIDAYEMHQISKKK 273


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,028
Number of Sequences: 438
Number of extensions: 1302
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6719922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)