Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_M09
(858 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 300 4e-81
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 300 4e-81
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 300 4e-81
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 300 4e-81
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 300 4e-81
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 300 4e-81
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 300 4e-81
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 300 4e-81
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 300 4e-81
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 300 4e-81
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 300 4e-81
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 300 4e-81
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 300 4e-81
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 300 4e-81
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 299 1e-80
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 297 3e-80
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 293 4e-79
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 159 9e-39
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 151 3e-36
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 138 2e-32
AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0 pr... 58 3e-08
BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog... 46 1e-04
BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog... 46 1e-04
AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protei... 46 1e-04
AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolo... 46 1e-04
AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens ... 46 1e-04
AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal pr... 46 2e-04
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 4.1
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 4.1
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 4.1
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 4.1
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 4.1
BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein. 31 5.4
AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo pr... 31 5.4
AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens ... 31 5.4
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 7.1
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 300 bits (737), Expect = 4e-81
Identities = 142/218 (65%), Positives = 170/218 (77%)
Frame = -2
Query: 857 NTMMRKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 678
NTMMRKAI+ H +NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIA
Sbjct: 58 NTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIA 117
Query: 677 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 498
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 497 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 318
LNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASV 237
Query: 317 PHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
PHSI NG+K +L +K F+ DPS F
Sbjct: 238 PHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 300 bits (737), Expect = 4e-81
Identities = 142/218 (65%), Positives = 170/218 (77%)
Frame = -2
Query: 857 NTMMRKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 678
NTMMRKAI+ H +NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIA
Sbjct: 58 NTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIA 117
Query: 677 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 498
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 497 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 318
LNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASV 237
Query: 317 PHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
PHSI NG+K +L +K F+ DPS F
Sbjct: 238 PHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 300 bits (737), Expect = 4e-81
Identities = 142/218 (65%), Positives = 170/218 (77%)
Frame = -2
Query: 857 NTMMRKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 678
NTMMRKAI+ H +NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIA
Sbjct: 58 NTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIA 117
Query: 677 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 498
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 497 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 318
LNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASV 237
Query: 317 PHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
PHSI NG+K +L +K F+ DPS F
Sbjct: 238 PHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 300 bits (737), Expect = 4e-81
Identities = 142/218 (65%), Positives = 170/218 (77%)
Frame = -2
Query: 857 NTMMRKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 678
NTMMRKAI+ H +NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIA
Sbjct: 58 NTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIA 117
Query: 677 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 498
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 497 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 318
LNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASV 237
Query: 317 PHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
PHSI NG+K +L +K F+ DPS F
Sbjct: 238 PHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 300 bits (737), Expect = 4e-81
Identities = 142/218 (65%), Positives = 170/218 (77%)
Frame = -2
Query: 857 NTMMRKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 678
NTMMRKAI+ H +NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIA
Sbjct: 58 NTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIA 117
Query: 677 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 498
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 497 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 318
LNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASV 237
Query: 317 PHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
PHSI NG+K +L +K F+ DPS F
Sbjct: 238 PHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 300 bits (737), Expect = 4e-81
Identities = 142/218 (65%), Positives = 170/218 (77%)
Frame = -2
Query: 857 NTMMRKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 678
NTMMRKAI+ H +NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIA
Sbjct: 58 NTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIA 117
Query: 677 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 498
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 497 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 318
LNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASV 237
Query: 317 PHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
PHSI NG+K +L +K F+ DPS F
Sbjct: 238 PHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 300 bits (737), Expect = 4e-81
Identities = 142/218 (65%), Positives = 170/218 (77%)
Frame = -2
Query: 857 NTMMRKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 678
NTMMRKAI+ H +NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIA
Sbjct: 58 NTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIA 117
Query: 677 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 498
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 497 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 318
LNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASV 237
Query: 317 PHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
PHSI NG+K +L +K F+ DPS F
Sbjct: 238 PHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 300 bits (737), Expect = 4e-81
Identities = 142/218 (65%), Positives = 170/218 (77%)
Frame = -2
Query: 857 NTMMRKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 678
NTMMRKAI+ H +NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIA
Sbjct: 58 NTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIA 117
Query: 677 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 498
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 497 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 318
LNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASV 237
Query: 317 PHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
PHSI NG+K +L +K F+ DPS F
Sbjct: 238 PHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 300 bits (737), Expect = 4e-81
Identities = 142/218 (65%), Positives = 170/218 (77%)
Frame = -2
Query: 857 NTMMRKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 678
NTMMRKAI+ H +NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIA
Sbjct: 58 NTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIA 117
Query: 677 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 498
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 497 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 318
LNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASV 237
Query: 317 PHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
PHSI NG+K +L +K F+ DPS F
Sbjct: 238 PHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 300 bits (737), Expect = 4e-81
Identities = 142/218 (65%), Positives = 170/218 (77%)
Frame = -2
Query: 857 NTMMRKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 678
NTMMRKAI+ H +NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIA
Sbjct: 58 NTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIA 117
Query: 677 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 498
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 497 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 318
LNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASV 237
Query: 317 PHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
PHSI NG+K +L +K F+ DPS F
Sbjct: 238 PHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 300 bits (737), Expect = 4e-81
Identities = 142/218 (65%), Positives = 170/218 (77%)
Frame = -2
Query: 857 NTMMRKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 678
NTMMRKAI+ H +NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIA
Sbjct: 58 NTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIA 117
Query: 677 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 498
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 497 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 318
LNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASV 237
Query: 317 PHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
PHSI NG+K +L +K F+ DPS F
Sbjct: 238 PHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 300 bits (737), Expect = 4e-81
Identities = 142/218 (65%), Positives = 170/218 (77%)
Frame = -2
Query: 857 NTMMRKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 678
NTMMRKAI+ H +NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIA
Sbjct: 58 NTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIA 117
Query: 677 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 498
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 497 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 318
LNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASV 237
Query: 317 PHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
PHSI NG+K +L +K F+ DPS F
Sbjct: 238 PHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 300 bits (737), Expect = 4e-81
Identities = 142/218 (65%), Positives = 170/218 (77%)
Frame = -2
Query: 857 NTMMRKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 678
NTMMRKAI+ H +NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIA
Sbjct: 58 NTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIA 117
Query: 677 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 498
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 497 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 318
LNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASV 237
Query: 317 PHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
PHSI NG+K +L +K F+ DPS F
Sbjct: 238 PHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 300 bits (737), Expect = 4e-81
Identities = 142/218 (65%), Positives = 170/218 (77%)
Frame = -2
Query: 857 NTMMRKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 678
NTMMRKAI+ H +NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIA
Sbjct: 58 NTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIA 117
Query: 677 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 498
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 497 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 318
LNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASV 237
Query: 317 PHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
PHSI NG+K +L +K F+ DPS F
Sbjct: 238 PHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 299 bits (733), Expect = 1e-80
Identities = 141/218 (64%), Positives = 170/218 (77%)
Frame = -2
Query: 857 NTMMRKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 678
NTMMRKAI+ H +NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIA
Sbjct: 58 NTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIA 117
Query: 677 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 498
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 497 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 318
LNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASV 237
Query: 317 PHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
PHSI NG++ +L +K F+ DPS F
Sbjct: 238 PHSIINGYERVLALSVETDYTFPLAEKVKAFLADPSAF 275
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 297 bits (729), Expect = 3e-80
Identities = 141/218 (64%), Positives = 169/218 (77%)
Frame = -2
Query: 857 NTMMRKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 678
NTMMRKAI+ H +NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIA
Sbjct: 58 NTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIA 117
Query: 677 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 498
P V +PA NTGLGPEKTSF QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFSQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 497 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 318
LNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASV 237
Query: 317 PHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
PHSI NG+K +L +K F+ DPS F
Sbjct: 238 PHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 293 bits (720), Expect = 4e-79
Identities = 140/218 (64%), Positives = 167/218 (76%)
Frame = -2
Query: 857 NTMMRKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 678
NTMMRKAI+ H +NNPALEKLLPHI GNVGFVFT+ DL E+RD LL NKV A AR GAIA
Sbjct: 58 NTMMRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIA 117
Query: 677 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 498
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 497 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 318
LNISPFS+GLV++QV+D+G+I+ PE+LD E L ++F GV NVA++ L GYPT+AS
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASV 237
Query: 317 PHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
PHSI NG+K +L +K F+ DPS F
Sbjct: 238 PHSIINGYKRVLALSVETDYTFPLAENVKAFLADPSAF 275
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 159 bits (387), Expect = 9e-39
Identities = 75/98 (76%), Positives = 83/98 (84%)
Frame = -2
Query: 857 NTMMRKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 678
NTMMRKAI+ H +NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIA
Sbjct: 58 NTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIA 117
Query: 677 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 564
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
Score = 58.4 bits (135), Expect = 3e-08
Identities = 27/58 (46%), Positives = 34/58 (58%)
Frame = -2
Query: 377 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 156 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 213
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 151 bits (366), Expect = 3e-36
Identities = 73/98 (74%), Positives = 82/98 (83%)
Frame = -2
Query: 857 NTMMRKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 678
NTMMRKAI+ H +NNPALEKLLP ++GNVGFVFT+ DL E+RD LL NKV A AR GAIA
Sbjct: 58 NTMMRKAIRGHLENNPALEKLLP-LRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIA 116
Query: 677 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 564
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 117 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 154
Score = 58.4 bits (135), Expect = 3e-08
Identities = 27/58 (46%), Positives = 34/58 (58%)
Frame = -2
Query: 377 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 155 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 212
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 138 bits (335), Expect = 2e-32
Identities = 65/114 (57%), Positives = 82/114 (71%)
Frame = -2
Query: 545 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVAN 366
K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV N
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRN 61
Query: 365 VAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
VA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 62 VASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 115
>AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0
protein.
Length = 93
Score = 58.4 bits (135), Expect = 3e-08
Identities = 27/58 (46%), Positives = 34/58 (58%)
Frame = -2
Query: 377 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 204
GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 1 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 58
>BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 46.4 bits (105), Expect = 1e-04
Identities = 33/149 (22%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
Frame = -2
Query: 845 RKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV 666
R ++ DN L ++ ++G VG +FT EV + + AR G A +V
Sbjct: 79 RSPSDEYKDN---LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTV 135
Query: 665 VIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 489
+ P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 136 SLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGY 195
Query: 488 SPFSYGLVVKQVYDSGTIFAPEILDIKPE 402
+ + +K ++DS + ++ D PE
Sbjct: 196 EMAEFKVTIKYMWDSQSGRFQQMGDDLPE 224
>BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 46.4 bits (105), Expect = 1e-04
Identities = 33/149 (22%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
Frame = -2
Query: 845 RKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV 666
R ++ DN L ++ ++G VG +FT EV + + AR G A +V
Sbjct: 79 RSPSDEYKDN---LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTV 135
Query: 665 VIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 489
+ P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 136 SLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGY 195
Query: 488 SPFSYGLVVKQVYDSGTIFAPEILDIKPE 402
+ + +K ++DS + ++ D PE
Sbjct: 196 EMAEFKVTIKYMWDSQSGRFQQMGDDLPE 224
>AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protein
PO-like protein.
Length = 239
Score = 46.4 bits (105), Expect = 1e-04
Identities = 33/149 (22%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
Frame = -2
Query: 845 RKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV 666
R ++ DN L ++ ++G VG +FT EV + + AR G A +V
Sbjct: 79 RSPSDEYKDN---LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTV 135
Query: 665 VIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 489
+ P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 136 SLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGY 195
Query: 488 SPFSYGLVVKQVYDSGTIFAPEILDIKPE 402
+ + +K ++DS + ++ D PE
Sbjct: 196 EMAEFKVTIKYMWDSQSGRFQQMGDDLPE 224
>AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 46.4 bits (105), Expect = 1e-04
Identities = 33/149 (22%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
Frame = -2
Query: 845 RKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV 666
R ++ DN L ++ ++G VG +FT EV + + AR G A +V
Sbjct: 79 RSPSDEYKDN---LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTV 135
Query: 665 VIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 489
+ P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 136 SLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGY 195
Query: 488 SPFSYGLVVKQVYDSGTIFAPEILDIKPE 402
+ + +K ++DS + ++ D PE
Sbjct: 196 EMAEFKVTIKYMWDSQSGRFQQMGDDLPE 224
>AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ14663 fis, clone NT2RP2002862, weakly similar to
60S ACIDIC RIBOSOMAL PROTEIN P0. ).
Length = 239
Score = 46.4 bits (105), Expect = 1e-04
Identities = 33/149 (22%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
Frame = -2
Query: 845 RKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV 666
R ++ DN L ++ ++G VG +FT EV + + AR G A +V
Sbjct: 79 RSPSDEYKDN---LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTV 135
Query: 665 VIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 489
+ P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 136 SLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGY 195
Query: 488 SPFSYGLVVKQVYDSGTIFAPEILDIKPE 402
+ + +K ++DS + ++ D PE
Sbjct: 196 EMAEFKVTIKYMWDSQSGRFQQMGDDLPE 224
>AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal
protein PO protein.
Length = 239
Score = 45.6 bits (103), Expect = 2e-04
Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 1/149 (0%)
Frame = -2
Query: 845 RKAIKDHXDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV 666
R ++ DN + K L +G VG +FT EV + + AR G A +V
Sbjct: 79 RSPSDEYKDNLHQVSKTL---RGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTV 135
Query: 665 VIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 489
+ P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 136 SLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGY 195
Query: 488 SPFSYGLVVKQVYDSGTIFAPEILDIKPE 402
+ + +K ++DS + ++ D PE
Sbjct: 196 EMAEFKVTIKYMWDSQSGRFQQMGDDLPE 224
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +1
Query: 361 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 540
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 249 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 307
Query: 541 GFKMCTSL 564
G +S+
Sbjct: 308 GLSTSSSV 315
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +1
Query: 361 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 540
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 541 GFKMCTSL 564
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +1
Query: 361 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 540
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 541 GFKMCTSL 564
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +1
Query: 361 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 540
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 541 GFKMCTSL 564
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +1
Query: 361 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 540
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 541 GFKMCTSL 564
G +S+
Sbjct: 273 GLSTSSSV 280
>BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein.
Length = 568
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -2
Query: 527 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 351
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 282
>AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo
protein.
Length = 571
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -2
Query: 527 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 351
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 282
>AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ40219 fis, clone TESTI2021637, moderately
similar to LIVER CARBOXYLESTERASE PRECURSOR (EC
3.1.1.1). ).
Length = 207
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -2
Query: 527 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 351
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 85 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 139
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 445 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 564
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,486,978
Number of Sequences: 237096
Number of extensions: 2480174
Number of successful extensions: 5971
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 5672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5969
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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