Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_M03
         (736 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0672 + 27164628-27164792,27164903-27164965,27165298-271654...    61   8e-10
02_02_0540 - 11334744-11334832,11335445-11335494,11335574-11336805     30   2.2  
06_03_0693 - 23572499-23572618,23572854-23572991,23573855-23575066     29   3.8  
03_01_0577 + 4261249-4262055,4262149-4262203,4262293-4262468,426...    29   5.1  
05_07_0048 + 27321906-27322190,27322897-27323441,27323552-273236...    28   6.7  

>04_04_0672 +
           27164628-27164792,27164903-27164965,27165298-27165408,
           27165454-27165537,27166081-27166194,27166901-27167494,
           27167604-27167675,27167761-27167997
          Length = 479

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 48/145 (33%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
 Frame = -3

Query: 731 ILXTGPIRSLITFLVNKGITQLNEYPEQVELLRKIWFTKYARHWTGLCKCSCAFENVFMA 552
           I  T PI+ L  +LV KG+    +Y +   +L  +WF  Y R   G    S AFE+VF+ 
Sbjct: 309 IARTAPIKYLHRYLVLKGVAS-QDYEDFKRMLTSLWFDLYGRG--GSSSSSSAFEHVFVG 365

Query: 551 ELKSNEVLGLHSWLFFAKRELDHKANYLGYI------DKLDLSGKGLILK--QHSVLSET 396
           E+K     G +    F   E +   +Y GYI      +  D   + L ++   H VL   
Sbjct: 366 EIKGRRGQGENE---FYLEEANGNVDYQGYIFPRRRGESPDSETQLLTIQFEWHGVLKSV 422

Query: 395 KDAPEVNMFVGTSPELETALYTLCF 321
                    +G SPE E ALYTLCF
Sbjct: 423 SST-----LIGVSPEFEVALYTLCF 442


>02_02_0540 - 11334744-11334832,11335445-11335494,11335574-11336805
          Length = 456

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -3

Query: 653 EQVELLRKIWFTKYARHWTGLCKCSCAFENVFMAELKSNEVLG 525
           E++  L  IW  K+  H TGLC      +N F+ E +  ++LG
Sbjct: 392 ERIYPLLMIWPPKFPAHLTGLCTLVYLVDNQFLLE-RGMKILG 433


>06_03_0693 - 23572499-23572618,23572854-23572991,23573855-23575066
          Length = 489

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 420 AALGVERNERRARSEHVCWHLPRTGDRSVHALFH 319
           A +GV+  ER     H C++   TG+ SVH   H
Sbjct: 175 AFVGVQNWERHFWDAHACFYSSETGEWSVHINIH 208


>03_01_0577 + 4261249-4262055,4262149-4262203,4262293-4262468,
            4262554-4262718,4262811-4263178,4263225-4263861,
            4263952-4265844,4266325-4266672
          Length = 1482

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 315  GHETERVQSGLQFGGGANKHVHFGRVFRFAQHRVLLEDQ 431
            G+ET+  +SG+Q  GG  + +   R     Q R+LL D+
Sbjct: 1363 GYETQVGESGVQLSGGQKQRIAIARAI-VKQARILLLDE 1400


>05_07_0048 +
           27321906-27322190,27322897-27323441,27323552-27323638,
           27323878-27324116,27324909-27325114,27325227-27325310
          Length = 481

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -2

Query: 468 GLHRQAGS*WQRADPQAALGVERNERRARSEHVCWHLP 355
           GL R+AG     A P AA+ V +N  +  S  +  HLP
Sbjct: 35  GLAREAGKVGSMALPMAAMSVAQNAVQVASNMMVGHLP 72


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,203,367
Number of Sequences: 37544
Number of extensions: 371128
Number of successful extensions: 887
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)