Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_L18
(737 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 73 3e-13
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 69 5e-12
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 63 2e-10
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 41 0.001
U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical pr... 37 0.017
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 36 0.040
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 31 0.64
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.64
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.64
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.64
Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 30 2.0
U14521-1|AAA64269.1| 360|Caenorhabditis elegans ppp-1 protein. 29 2.6
AC006608-3|AAF39757.1| 404|Caenorhabditis elegans Pyrophosphory... 29 2.6
AF025460-2|AAF02169.3| 545|Caenorhabditis elegans Prion-like-(q... 28 6.0
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 28 6.0
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 72.5 bits (170), Expect = 3e-13
Identities = 68/231 (29%), Positives = 94/231 (40%), Gaps = 3/231 (1%)
Frame = -1
Query: 722 DEXIIGGTDAGVNEYPHMVLLGYGDDVXNI-QWLCGGVLISERFVLTAGHCLSSREVGAV 546
D +IGG+++ + +P V L + + CGG LI FVLTA HC +
Sbjct: 55 DHRLIGGSESSPHSWPWTVQL-----LSRLGHHRCGGSLIDPNFVLTAAHCFAKDRRPTS 109
Query: 545 RYVYIGALARHETTNPSRRYAVIRAHRHPDYKP--PSKYNDIALLELDRQVPLDQYTVPA 372
V +G R + +P R AV HP Y PS Y D A++ + V P
Sbjct: 110 YSVRVGG-HRSGSGSPHRVTAV---SIHPWYNIGFPSSY-DFAIMRIHPPVNTSTTARPI 164
Query: 371 CLHTGDAVNDERASATGWGLTENRGSTSDVLQKVVLTKFTSAEXSDKYPTNRNMKRGFDP 192
CL + AV + TGWG T S S + + S P N
Sbjct: 165 CLPSLPAVENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLP---NYIGRIHL 221
Query: 191 RTQMCYGDRTMSRDTCQGDSGGPIQIXSKKMDCMYVVIGVTSFGRACGYAG 39
+ +C G D+CQGDSGGP+ D + + GV S+G C G
Sbjct: 222 PSMLCAGYSYGKIDSCQGDSGGPLMC---ARDGHWELTGVVSWGIGCARPG 269
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 68.5 bits (160), Expect = 5e-12
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 3/194 (1%)
Frame = -1
Query: 623 CGGVLISERFVLTAGHCLSSREVGAVRYVYIGALARHETTNPSRRYAVIRAHRHPDYKPP 444
CG ++ + ++TA HC E + V +G ++T + + + R H +P YK
Sbjct: 54 CGASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNNQTDGNEQIFYLQRIHFYPLYKDI 113
Query: 443 SKYNDIALLELDRQ-VPLDQYTVPACLHTGDAV--NDERASATGWGLTENRGSTSDVLQK 273
+ DIA+LE+ + ++Y P CL + D V + +GWG R ++ LQ
Sbjct: 114 FSH-DIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCVVSGWGSMGLR--YAERLQA 170
Query: 272 VVLTKFTSAEXSDKYPTNRNMKRGFDPRTQMCYGDRTMSRDTCQGDSGGPIQIXSKKMDC 93
++ + + +M R+ C G D+CQGDSGGP ++ D
Sbjct: 171 ALIPIINRFDCVNSSQIYSSMS-----RSAFCAGYLEGGIDSCQGDSGGP--FACRREDG 223
Query: 92 MYVVIGVTSFGRAC 51
+V+ GV S+G C
Sbjct: 224 AFVLAGVISWGDGC 237
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 62.9 bits (146), Expect = 2e-10
Identities = 70/230 (30%), Positives = 100/230 (43%), Gaps = 12/230 (5%)
Frame = -1
Query: 713 IIGGT--DAGVNEYPHMVLLGYGDDVXNIQWLCGGVLISERFVLTAGHCLSSREVGAVRY 540
IIGG D G N +V YGD+ I LCG +I + +++TA HC + + +
Sbjct: 38 IIGGNSIDDGANWMAKLV--SYGDNGQGI--LCGATVIDDFWLVTAAHCALQLQTRS--F 91
Query: 539 VYIGALARHETTNPSRRYAVIRAHRHPDYKPPSKYNDIALLELDRQVPLDQYTV-PACLH 363
VY+ R N R ++V A+ H Y + NDIALL + L + + P CL
Sbjct: 92 VYV----REPKNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSD--LSKLGIKPVCLV 145
Query: 362 TGDAV---NDERASATGWGLTENRGSTSDVL----QKVVLTKFTSAEXSDKYPTNRNMKR 204
D+ + G+GLT S+ + Q + T D T R +
Sbjct: 146 HDDSKLLKQYKNGVVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSL 205
Query: 203 GFDPRT--QMCYGDRTMSRDTCQGDSGGPIQIXSKKMDCMYVVIGVTSFG 60
T Q+C G T GDSGGP+ I K + YV IG+TS+G
Sbjct: 206 LSVKITGYQICAG--AYLHGTAPGDSGGPLLI--HKSNGEYVQIGITSYG 251
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 40.7 bits (91), Expect = 0.001
Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 1/131 (0%)
Frame = -1
Query: 440 KYNDIALLELDRQVPLDQYTVPACLHTGDAVNDERASATGWGLTENRGSTSDVLQKVVLT 261
K +D A++E+++++ + P CL + + + GWG N + +
Sbjct: 141 KGHDWAIVEVEKRIHFSENVRPICLPRPNMYYTKSLAVPGWGRIFNESGPLIHEIPMRID 200
Query: 260 KFTSAEXSDKYPTNRNMKRGFDPRTQMCYGDRTMSRDTCQGDSGGPIQIXSKKMDCMYVV 81
+ SD+ P + + F T M + + R TC GDSGG ++ + +
Sbjct: 201 RDCKRPWSDRLPADAD---DFICATSMNVSNYSAPR-TCHGDSGGGLEYRDDNYGRAF-L 255
Query: 80 IGVTSFG-RAC 51
I +TSFG R C
Sbjct: 256 IAITSFGTRGC 266
>U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical
protein B0286.6 protein.
Length = 279
Score = 36.7 bits (81), Expect = 0.017
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 4/133 (3%)
Frame = -1
Query: 437 YNDIALLELDRQVPLDQYTVPACLHTGDAVNDERASATGWGL-TENRGSTSDVLQKVVLT 261
+NDIA+ EL+ + + PACL + + R TG+ L R + VL+ L
Sbjct: 120 FNDIAVFELEEPIEFSKDIFPACLPSAPKI--PRIRETGYKLFGYGRDPSDSVLESGKLK 177
Query: 260 KFTS--AEXSDKYPTNRNMKRGFDPRTQMCYGDRTMSRD-TCQGDSGGPIQIXSKKMDCM 90
S AE SD +P Y ++R +C GDSG + + + +
Sbjct: 178 SLYSFVAECSDDFPYGG------------VYCTSAVNRGLSCDGDSGSGV-VRTSDTRNV 224
Query: 89 YVVIGVTSFGRAC 51
V++GV S G C
Sbjct: 225 QVLVGVLSAGMPC 237
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 35.5 bits (78), Expect = 0.040
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = -1
Query: 737 CHHDADEXIIGGTDAGVNEYPHMVLLGYGDDVXNIQ--WL--CGGVLISERFVLTAGHCL 570
C + I G A ++E P V + +V NI W C G L S R +LTA HC
Sbjct: 33 CGKNVKSKIFNGRKAEIDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPRHILTATHCA 92
Query: 569 SS 564
++
Sbjct: 93 AT 94
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -1
Query: 668 VLLGYGDDVXNIQWLCGGVLISERFVLTAGHCLSSREVGAV 546
V+ + D N+ CGGVLI+ V+T+ HC+ S + AV
Sbjct: 34 VITRFPDGTTNV---CGGVLIAPSIVITSAHCVFSGDDFAV 71
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 352 PSMTSGPPPPAGDSPRTGAP 293
P +T GPPPP G P TG P
Sbjct: 707 PPITGGPPPPPGLPPITGGP 726
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 352 PSMTSGPPPPAGDSPRTGAP 293
P +T GPPPP G P TG P
Sbjct: 707 PPITGGPPPPPGLPPITGGP 726
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 352 PSMTSGPPPPAGDSPRTGAP 293
P +T GPPPP G P TG P
Sbjct: 290 PPITGGPPPPPGLPPITGGP 309
>Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical
protein C49C3.4 protein.
Length = 1566
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 546 DCANLSTG*AVSGCEHEALTDEHPPAQPLDVXDIVTVAEQDHV 674
DCANL+ A GC T+ P + PLD+ T E +
Sbjct: 351 DCANLNITTASGGCTGIVFTNAAPASGPLDLAISTTYVENPSI 393
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 626 LCGGVLISERFVLTAGHC 573
+CGG LI+ + VLTA HC
Sbjct: 61 ICGGTLITLKHVLTAAHC 78
>U14521-1|AAA64269.1| 360|Caenorhabditis elegans ppp-1 protein.
Length = 360
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = -2
Query: 547 SDTCISAPSPGTRPRTRPAATQSSAL 470
+DTC++AP+PG++ + +P AT A+
Sbjct: 140 ADTCVNAPAPGSKSK-KPKATDVMAI 164
>AC006608-3|AAF39757.1| 404|Caenorhabditis elegans
Pyrophosphorylase family protein 1 protein.
Length = 404
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = -2
Query: 547 SDTCISAPSPGTRPRTRPAATQSSAL 470
+DTC++AP+PG++ + +P AT A+
Sbjct: 140 ADTCVNAPAPGSKSK-KPKATDVMAI 164
>AF025460-2|AAF02169.3| 545|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 41
protein.
Length = 545
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 334 PPPPAGDSPRTGAPRR 287
PPPPA +P GAPR+
Sbjct: 94 PPPPASSAPIVGAPRQ 109
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = -1
Query: 713 IIGGTDAGVNEYPHMVLLGYGDDVXNIQWLCGGVLISERFVLTAGHCLSSR 561
+ G DA +E P V C G ++S R +L A HC + +
Sbjct: 163 VYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHCFAGQ 213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,233,551
Number of Sequences: 27780
Number of extensions: 373881
Number of successful extensions: 1669
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1649
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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