Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_L17
         (379 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY183123-1|AAO66337.1|  625|Homo sapiens truncated Rho GTPase-ac...    29   3.8  
BC034415-1|AAH34415.1|  458|Homo sapiens bactericidal/permeabili...    29   5.0  
AY358723-1|AAQ89085.1|  458|Homo sapiens DJ726C3.2 protein.            29   5.0  
AL121756-5|CAC18884.1|  458|Homo sapiens bactericidal/permeabili...    29   5.0  
AK172819-1|BAD18788.1|  458|Homo sapiens protein ( Homo sapiens ...    29   5.0  
AF465765-1|AAM73983.1|  458|Homo sapiens bactericidal/permeabili...    29   5.0  

>AY183123-1|AAO66337.1|  625|Homo sapiens truncated Rho
           GTPase-activating protein 4 splice form 2 protein.
          Length = 625

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -3

Query: 248 DLWSTITTLSTTPSYSAKGLRTFITFYPRCHPPLASPFRAFWPMIRLTPPLPLTSLQ 78
           DL+  +   S TPS+ A G     ++ PRC P     +R  W   RL P LP  + Q
Sbjct: 570 DLFGELLASSGTPSWRAWGRTMSRSWKPRC-PHRRMTWRGSW---RLWPALPTRAAQ 622


>BC034415-1|AAH34415.1|  458|Homo sapiens
           bactericidal/permeability-increasing protein-like 1
           protein.
          Length = 458

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -2

Query: 267 VGTNINRPMVYHHNAKYDSKLFRKRVENLHYVLPQV 160
           +GT   +P++ H NA     +    V NLHYV P++
Sbjct: 406 MGTVFEKPLLDHLNALLAMGIALPGVVNLHYVAPEI 441


>AY358723-1|AAQ89085.1|  458|Homo sapiens DJ726C3.2 protein.
          Length = 458

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -2

Query: 267 VGTNINRPMVYHHNAKYDSKLFRKRVENLHYVLPQV 160
           +GT   +P++ H NA     +    V NLHYV P++
Sbjct: 406 MGTVFEKPLLDHLNALLAMGIALPGVVNLHYVAPEI 441


>AL121756-5|CAC18884.1|  458|Homo sapiens
           bactericidal/permeability-increasing protein-like1
           protein.
          Length = 458

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -2

Query: 267 VGTNINRPMVYHHNAKYDSKLFRKRVENLHYVLPQV 160
           +GT   +P++ H NA     +    V NLHYV P++
Sbjct: 406 MGTVFEKPLLDHLNALLAMGIALPGVVNLHYVAPEI 441


>AK172819-1|BAD18788.1|  458|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23980 fis, clone HEP20953. ).
          Length = 458

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -2

Query: 267 VGTNINRPMVYHHNAKYDSKLFRKRVENLHYVLPQV 160
           +GT   +P++ H NA     +    V NLHYV P++
Sbjct: 406 MGTVFEKPLLDHLNALLAMGIALPGVVNLHYVAPEI 441


>AF465765-1|AAM73983.1|  458|Homo sapiens
           bactericidal/permeability-increasing protein-like 1
           protein.
          Length = 458

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -2

Query: 267 VGTNINRPMVYHHNAKYDSKLFRKRVENLHYVLPQV 160
           +GT   +P++ H NA     +    V NLHYV P++
Sbjct: 406 MGTVFEKPLLDHLNALLAMGIALPGVVNLHYVAPEI 441


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,795,996
Number of Sequences: 237096
Number of extensions: 1058584
Number of successful extensions: 2025
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2025
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)