Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_L12
         (487 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69904-3|CAA93780.1|  372|Caenorhabditis elegans Hypothetical pr...    33   0.15 
U23484-5|AAK93844.1|  590|Caenorhabditis elegans Hypothetical pr...    31   0.44 
Z81054-10|CAB02882.3|  561|Caenorhabditis elegans Hypothetical p...    30   0.77 
Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical pr...    29   1.4  
Z81515-10|CAH60782.1|  413|Caenorhabditis elegans Hypothetical p...    27   5.5  
Z81038-2|CAB02757.1|  454|Caenorhabditis elegans Hypothetical pr...    27   5.5  
U23523-7|AAC46562.2|   85|Caenorhabditis elegans Hypothetical pr...    27   7.2  
AF106573-7|AAC78158.1|  838|Caenorhabditis elegans Hypothetical ...    27   9.5  

>Z69904-3|CAA93780.1|  372|Caenorhabditis elegans Hypothetical
           protein ZK20.3 protein.
          Length = 372

 Score = 32.7 bits (71), Expect = 0.15
 Identities = 22/62 (35%), Positives = 32/62 (51%)
 Frame = -2

Query: 246 DGRPLDTLDVNLDRAAHYTSKALGVHLLKKRSAVIAPISTVAVAHSPLITPAAHIAYSAP 67
           +G+ LD   V +      +SK + V L K++   +AP STVA A  P+   AA  +  AP
Sbjct: 99  NGKILDD-SVKVGEVGFDSSKFVVVMLSKRKVTEVAPSSTVATAAEPVPVAAAPASNPAP 157

Query: 66  LA 61
            A
Sbjct: 158 AA 159


>U23484-5|AAK93844.1|  590|Caenorhabditis elegans Hypothetical
           protein EEED8.16 protein.
          Length = 590

 Score = 31.1 bits (67), Expect = 0.44
 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 7/50 (14%)
 Frame = +1

Query: 286 QRPSVVAERRNQRCG------VCKRCG-VGDGRHESAIYGRQHAGQHHQL 414
           Q P VVAE+R   CG      +C  CG +G GR     Y  QHA +H +L
Sbjct: 300 QSPEVVAEQRCNDCGMSNDLWICLICGNIGCGR-----YAEQHAQRHWEL 344


>Z81054-10|CAB02882.3|  561|Caenorhabditis elegans Hypothetical
           protein F01D4.3 protein.
          Length = 561

 Score = 30.3 bits (65), Expect = 0.77
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = -1

Query: 433 DHLQNDEAGGVVLHVGGR----IWRTRGAHHLHRTACIHRTV 320
           DH++  +A G V+ +  +    I   RG  +LH+  CIHR +
Sbjct: 358 DHMKKAKATGTVVPIAEKVRFCIGAARGIEYLHQNNCIHRDI 399


>Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical protein
            F21G4.6 protein.
          Length = 1885

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 339  AVRCR*WAPRVRHIRPPTCRTTPPASSFCKWSVL 440
            A++C  W P V  +R PT    PP    C   VL
Sbjct: 1316 AMKCFNWVPVVEILRKPTITCLPPTGHVCDVMVL 1349


>Z81515-10|CAH60782.1|  413|Caenorhabditis elegans Hypothetical
           protein F26H11.2g protein.
          Length = 413

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -2

Query: 138 PISTVAVAHSPLITPAAHIAYSAP-LATAH 52
           PI  + V   P+  PA+H+A+  P  AT H
Sbjct: 83  PIKKITVFQKPVEPPASHVAFHTPGSATPH 112


>Z81038-2|CAB02757.1|  454|Caenorhabditis elegans Hypothetical
           protein C25A1.4 protein.
          Length = 454

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 17/46 (36%), Positives = 19/46 (41%)
 Frame = +1

Query: 163 QQVDAESFAGVVRRAVQVNVESVEGPAVGAEDVGGLAGGKGQRPSV 300
           Q V A  F GVV +A         GP  G   VGG  G    +P V
Sbjct: 321 QVVSAGGFGGVVEQANFARSVMNNGPFGGNAGVGGAGGATFAQPDV 366


>U23523-7|AAC46562.2|   85|Caenorhabditis elegans Hypothetical
           protein F53A9.7 protein.
          Length = 85

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 358 GRHESAIYGRQHAGQHHQLHH 420
           G H    +G QH   HH+ HH
Sbjct: 57  GEHHGGHHGVQHYESHHESHH 77


>AF106573-7|AAC78158.1|  838|Caenorhabditis elegans Hypothetical
           protein F52D2.6 protein.
          Length = 838

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +1

Query: 352 GDGRHESAIYGRQHAGQHHQLHHSVSG--LCCVCNSQQLIIGRPNSF 486
           G   H S  +   ++   HQL+HS+SG     VCN    ++   N F
Sbjct: 258 GRSHHGSVSFNGNYSINCHQLNHSMSGEEYGKVCNQLMTLVQANNVF 304


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,870,250
Number of Sequences: 27780
Number of extensions: 186038
Number of successful extensions: 703
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)