Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_L11
         (438 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M17886-1|AAA36471.1|  114|Homo sapiens protein ( Human acidic ri...    97   2e-20
BC007590-1|AAH07590.1|  114|Homo sapiens ribosomal protein, larg...    97   2e-20
BC003369-1|AAH03369.1|  114|Homo sapiens ribosomal protein, larg...    97   2e-20
AY303789-1|AAP68820.1|  113|Homo sapiens acidic ribosomal phosph...    97   2e-20
AB061836-1|BAB79474.1|  114|Homo sapiens ribosomal protein P1 pr...    97   2e-20
CR450339-1|CAG29335.1|  114|Homo sapiens RPLP1 protein.                97   3e-20
CR542209-1|CAG47005.1|  114|Homo sapiens RPLP1 protein.                90   3e-18
AK128281-1|BAC87365.1|  121|Homo sapiens protein ( Homo sapiens ...    29   7.0  

>M17886-1|AAA36471.1|  114|Homo sapiens protein ( Human acidic
           ribosomal phosphoprotein P1 mRNA, complete cds. ).
          Length = 114

 Score = 97.1 bits (231), Expect = 2e-20
 Identities = 50/111 (45%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
 Frame = -2

Query: 329 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 150
           M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 149 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFG 3
            N+G+G                                    ESDDDMGFG
Sbjct: 61  CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFG 111


>BC007590-1|AAH07590.1|  114|Homo sapiens ribosomal protein, large,
           P1 protein.
          Length = 114

 Score = 97.1 bits (231), Expect = 2e-20
 Identities = 50/111 (45%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
 Frame = -2

Query: 329 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 150
           M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 149 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFG 3
            N+G+G                                    ESDDDMGFG
Sbjct: 61  CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFG 111


>BC003369-1|AAH03369.1|  114|Homo sapiens ribosomal protein, large,
           P1 protein.
          Length = 114

 Score = 97.1 bits (231), Expect = 2e-20
 Identities = 50/111 (45%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
 Frame = -2

Query: 329 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 150
           M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 149 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFG 3
            N+G+G                                    ESDDDMGFG
Sbjct: 61  CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFG 111


>AY303789-1|AAP68820.1|  113|Homo sapiens acidic ribosomal
           phosphoprotein P1 protein.
          Length = 113

 Score = 97.1 bits (231), Expect = 2e-20
 Identities = 50/111 (45%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
 Frame = -2

Query: 329 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 150
           M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 149 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFG 3
            N+G+G                                    ESDDDMGFG
Sbjct: 61  CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFG 111


>AB061836-1|BAB79474.1|  114|Homo sapiens ribosomal protein P1
           protein.
          Length = 114

 Score = 97.1 bits (231), Expect = 2e-20
 Identities = 50/111 (45%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
 Frame = -2

Query: 329 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 150
           M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 149 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFG 3
            N+G+G                                    ESDDDMGFG
Sbjct: 61  CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFG 111


>CR450339-1|CAG29335.1|  114|Homo sapiens RPLP1 protein.
          Length = 114

 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 49/111 (44%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
 Frame = -2

Query: 329 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 150
           M S +ELAC+YSAL+L DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI
Sbjct: 1   MASVSELACIYSALVLHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 149 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFG 3
            N+G+G                                    ESDDDMGFG
Sbjct: 61  CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFG 111


>CR542209-1|CAG47005.1|  114|Homo sapiens RPLP1 protein.
          Length = 114

 Score = 90.2 bits (214), Expect = 3e-18
 Identities = 48/111 (43%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
 Frame = -2

Query: 329 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 150
           M S +ELA +YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI
Sbjct: 1   MASVSELARIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 149 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFG 3
            ++G+G                                    ESDDDMGFG
Sbjct: 61  CDVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFG 111


>AK128281-1|BAC87365.1|  121|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46418 fis, clone THYMU3012907. ).
          Length = 121

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +2

Query: 161 GH*CLPRLWRTDLANMA--LHLQPPLSRWWKFSHQLRQHHHPPG 286
           GH CLP   ++ LA  +  +H Q  L   W   HQ     HPPG
Sbjct: 5   GHCCLPGGAKSGLAGSSAPVHRQGRLRTVWAPQHQRVAPWHPPG 48


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,760,507
Number of Sequences: 237096
Number of extensions: 1030210
Number of successful extensions: 1590
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1590
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)