Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_L06
(714 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-5|AAN65330.1| 374|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AL032637-12|CAA21614.1| 338|Caenorhabditis elegans Hypothetical... 35 0.050
AF100672-1|AAC68997.2| 334|Caenorhabditis elegans Hypothetical ... 31 1.1
Z48009-8|CAA88081.1| 329|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical... 29 2.5
AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical ... 29 2.5
AC199169-5|ABO33251.1| 314|Caenorhabditis elegans Hypothetical ... 29 2.5
U64840-6|AAB04964.1| 574|Caenorhabditis elegans Hypothetical pr... 28 5.8
U53141-5|AAA96107.1| 574|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF125450-1|AAD12815.1| 188|Caenorhabditis elegans Hypothetical ... 28 7.6
>U23139-5|AAN65330.1| 374|Caenorhabditis elegans Hypothetical
protein F13H8.3 protein.
Length = 374
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Frame = -3
Query: 712 ALIHLXKTHEGNLTIITIGALTNLALAIKTDPTFLGRLAHVYIGAGHI----HTEEYPTA 545
A+I+L K+ + ++ ++ +G LTN+A+AI+ DP R+ V I G+ +T+ TA
Sbjct: 135 AIINLTKSTK-DIILVGLGPLTNIAMAIRKDPDISKRVKQVVIMGGNYLGVGNTQFNSTA 193
Query: 544 EFNAHMDVEAYHVV 503
EFN MD EA H+V
Sbjct: 194 EFNFLMDPEAAHIV 207
>AL032637-12|CAA21614.1| 338|Caenorhabditis elegans Hypothetical
protein Y43F8C.13 protein.
Length = 338
Score = 35.1 bits (77), Expect = 0.050
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = -3
Query: 712 ALIHLXKTHEGNLTIITIGALTNLALAIKTDPTFLGRLAHVYIGAGHIH----TEEYPTA 545
ALI + + + + T++TIG LTN+A+A++ F + + I G+ + + +A
Sbjct: 117 ALIDILRENR-DATLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGNYYAVGNVDGGSSA 175
Query: 544 EFNAHMDVEAYHVVTENANPEKVTIFPF 461
E+N H D EA +V +TI P+
Sbjct: 176 EYNFHGDPEAASIVLRRMKC-PITIVPW 202
>AF100672-1|AAC68997.2| 334|Caenorhabditis elegans Hypothetical
protein W05E7.2 protein.
Length = 334
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 16 LILISITIKVSFXSVSIFGLKSVFLVL 96
L+L ++ + F SIF LKS+FL+L
Sbjct: 83 LVLFGFSLDIDFNDASIFSLKSIFLML 109
>Z48009-8|CAA88081.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.11 protein.
Length = 329
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 13 YLILISITIKVSFXSVSIFGLKSVF-LVLSLGEFSGIVREEIQ*KLSILFSLDRVSDANI 189
YL LIS+T S+ +V I KS+F L + F +V + L + +L R+ N+
Sbjct: 27 YLSLISLTFIFSYFAVKIVHQKSIFQLSTKILLFHNLVSANLHQLLYLFSALRRL---NL 83
Query: 190 GVFFIDK 210
F+ID+
Sbjct: 84 AYFYIDE 90
>AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical
protein Y18D10A.13 protein.
Length = 2417
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 266 IFVLLN*IRPQKQRDSRWVQSLPSIFSWQRDPLVFVLC 379
+ +LLN ++ Q R W+Q + I W L ++C
Sbjct: 1491 LLILLNALKKQPHRHEMWLQFVVQILPWVERSLATIVC 1528
>AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical
protein protein.
Length = 2417
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 266 IFVLLN*IRPQKQRDSRWVQSLPSIFSWQRDPLVFVLC 379
+ +LLN ++ Q R W+Q + I W L ++C
Sbjct: 1491 LLILLNALKKQPHRHEMWLQFVVQILPWVERSLATIVC 1528
>AC199169-5|ABO33251.1| 314|Caenorhabditis elegans Hypothetical
protein F38A1.11 protein.
Length = 314
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 215 IRLSIKKTPMFASLTLSRLKSIDSFYWISSRTMP 114
I+L+ K+T F + ++ K D YWI ++T P
Sbjct: 199 IKLNNKRTENFVTTEIATWKDSDIIYWIDNQTNP 232
>U64840-6|AAB04964.1| 574|Caenorhabditis elegans Hypothetical
protein ZC317.7 protein.
Length = 574
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = -1
Query: 222 TSNSFVDKEDAN--VRIAYSVKTEEYRQFLLDLFSND 118
+S+S D+EDA + +AYS E+++ ++LF D
Sbjct: 526 SSSSEDDEEDAGSLISVAYSTDNEDFKSCKIELFQED 562
>U53141-5|AAA96107.1| 574|Caenorhabditis elegans Hypothetical
protein C14C11.2 protein.
Length = 574
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = -1
Query: 222 TSNSFVDKEDAN--VRIAYSVKTEEYRQFLLDLFSND 118
+S+S D+EDA + +AYS E+++ ++LF D
Sbjct: 526 SSSSEDDEEDAGSLISVAYSTDNEDFKSCKIELFQED 562
>AF125450-1|AAD12815.1| 188|Caenorhabditis elegans Hypothetical
protein Y39F10A.1 protein.
Length = 188
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 199 FIDKRITCDSPXFLHTKRCYS 261
FI+ ++ C +P F H+ CYS
Sbjct: 34 FINSKLVCANPTFCHSDFCYS 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,057,200
Number of Sequences: 27780
Number of extensions: 350260
Number of successful extensions: 861
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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