Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_L05
         (604 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4129|AAF56714.1|  154|Drosophila melanogaster CG5402-PA...    31   0.91 
BT030255-1|ABN49394.1|  424|Drosophila melanogaster IP18339p pro...    29   6.4  
BT030205-1|ABN49344.1|  424|Drosophila melanogaster IP18039p pro...    29   6.4  

>AE014297-4129|AAF56714.1|  154|Drosophila melanogaster CG5402-PA
           protein.
          Length = 154

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +2

Query: 434 TATATDKSEIIS*GERTTRTTSLIKTESSNPSIVGRTASDSA 559
           TA  T +S + S    TTRTT    TES   S++  T +DS+
Sbjct: 107 TAPVTTESSLPSQETTTTRTTPFTTTESRTESVLETTTTDSS 148


>BT030255-1|ABN49394.1|  424|Drosophila melanogaster IP18339p
           protein.
          Length = 424

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +2

Query: 407 NNTAQAWSLTATATDKSEIIS*GERTTRTTSLIKTESSNPSIVGRTASDSAFEVCT 574
           ++T  A S  ++    +  IS    T  TTS I TESS  S      ++S+ E  T
Sbjct: 264 DSTTSAISTESSTDSTTSEISTESSTDSTTSAISTESSTDSTTSEVTTNSSTESTT 319


>BT030205-1|ABN49344.1|  424|Drosophila melanogaster IP18039p
           protein.
          Length = 424

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +2

Query: 407 NNTAQAWSLTATATDKSEIIS*GERTTRTTSLIKTESSNPSIVGRTASDSAFEVCT 574
           ++T  A S  ++    +  IS    T  TTS I TESS  S      ++S+ E  T
Sbjct: 264 DSTTSAISTESSTDSTTSEISTESSTDSTTSAISTESSTDSTTSEVTTNSSTESTT 319


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,899,556
Number of Sequences: 53049
Number of extensions: 409973
Number of successful extensions: 946
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)