Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_K23
(771 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical pr... 39 0.003
AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein. 39 0.003
AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein. 39 0.003
AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein. 39 0.003
AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3... 31 0.91
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z82266-4|CAB05180.1| 227|Caenorhabditis elegans Hypothetical pr... 30 2.1
U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4 p... 29 2.8
U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical p... 29 4.8
U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical p... 29 4.8
AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical ... 29 4.8
AC006689-1|AAF39971.2| 257|Caenorhabditis elegans Hypothetical ... 29 4.8
Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z82076-4|CAB04937.2| 438|Caenorhabditis elegans Hypothetical pr... 28 6.4
U41534-4|AAB47596.1| 323|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical ... 28 6.4
AF026207-1|AAB71266.1| 522|Caenorhabditis elegans Hypothetical ... 28 6.4
AC006662-5|AAF39894.1| 501|Caenorhabditis elegans Hypothetical ... 28 6.4
>Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = -1
Query: 378 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 217
G VI K D L +W++D + LLQKF P + R++++ + YSGW Y+
Sbjct: 627 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 686
Query: 216 PITEILDRNPRTDS 175
+ + + R+++
Sbjct: 687 RVAVKIIKQTRSET 700
>Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = -1
Query: 378 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 217
G VI K D L +W++D + LLQKF P + R++++ + YSGW Y+
Sbjct: 642 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 701
Query: 216 PITEILDRNPRTDS 175
+ + + R+++
Sbjct: 702 RVAVKIIKQTRSET 715
>Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = -1
Query: 378 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 217
G VI K D L +W++D + LLQKF P + R++++ + YSGW Y+
Sbjct: 627 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 686
Query: 216 PITEILDRNPRTDS 175
+ + + R+++
Sbjct: 687 RVAVKIIKQTRSET 700
>Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = -1
Query: 378 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 217
G VI K D L +W++D + LLQKF P + R++++ + YSGW Y+
Sbjct: 642 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 701
Query: 216 PITEILDRNPRTDS 175
+ + + R+++
Sbjct: 702 RVAVKIIKQTRSET 715
>AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein.
Length = 957
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = -1
Query: 378 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 217
G VI K D L +W++D + LLQKF P + R++++ + YSGW Y+
Sbjct: 627 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 686
Query: 216 PITEILDRNPRTDS 175
+ + + R+++
Sbjct: 687 RVAVKIIKQTRSET 700
>AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein.
Length = 972
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = -1
Query: 378 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 217
G VI K D L +W++D + LLQKF P + R++++ + YSGW Y+
Sbjct: 642 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 701
Query: 216 PITEILDRNPRTDS 175
+ + + R+++
Sbjct: 702 RVAVKIIKQTRSET 715
>AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein.
Length = 972
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = -1
Query: 378 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 217
G VI K D L +W++D + LLQKF P + R++++ + YSGW Y+
Sbjct: 642 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 701
Query: 216 PITEILDRNPRTDS 175
+ + + R+++
Sbjct: 702 RVAVKIIKQTRSET 715
>AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3
protein.
Length = 689
Score = 31.1 bits (67), Expect = 0.91
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = -1
Query: 759 LKLNEEDSDGS-GQGAEPEEFQDSGED----WTPDADSNEPASRTSRKRVSKPPVNNTXK 595
+K + D D S G G+EP++ DSG + T ++D +E + +K+ SK N K
Sbjct: 481 MKKQKNDKDSSEGSGSEPDDEYDSGSEKDASGTGESDPDE-ENIEPKKKESKEKKNKREK 539
Query: 594 KRK 586
K K
Sbjct: 540 KEK 542
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 747 EEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASR 643
EE+S+GS G+E E ++ ED D D EPA +
Sbjct: 214 EEESEGSEDGSEAFEASEASED---DEDDEEPAKK 245
>Z82266-4|CAB05180.1| 227|Caenorhabditis elegans Hypothetical
protein F23B2.6 protein.
Length = 227
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = -1
Query: 468 NKSDSSQSKDVPKHFHSGNFVLLKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMES 289
N +++ S D+ + F G F L K V ++ + + ++ L K D L+QKF +
Sbjct: 86 NLAETVISSDLQELF--GAFNLHKVSVNFNENGGAAGTGDITLKKYDADRLIQKFAGVAL 143
Query: 288 NGRVLH 271
+G+V+H
Sbjct: 144 DGKVMH 149
>U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4
protein.
Length = 697
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = -1
Query: 759 LKLNEEDSDGS-GQGAEPEEFQDSG-EDWTPDADSNEPASR---TSRKRVSKPPVNNTXK 595
+K +ED + S G G+EP++ DSG E + +EP S S++R +P K
Sbjct: 477 IKKKKEDKESSEGTGSEPDDEYDSGSEQDSSGTGESEPDSEQDVPSKRRKGEPKEKREKK 536
Query: 594 KRK 586
+++
Sbjct: 537 EKR 539
>U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical
protein C17G10.6b protein.
Length = 487
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -1
Query: 765 NSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPP 613
NS K + +G + E EE D+ ED + + N + RK+++ PP
Sbjct: 364 NSRKKKKGRKNGRKKNNEDEEEDDNDEDDDGNNEENGYKKKQKRKKINCPP 414
>U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical
protein C17G10.6a protein.
Length = 683
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -1
Query: 765 NSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPP 613
NS K + +G + E EE D+ ED + + N + RK+++ PP
Sbjct: 415 NSRKKKKGRKNGRKKNNEDEEEDDNDEDDDGNNEENGYKKKQKRKKINCPP 465
>AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical
protein Y39G8C.4 protein.
Length = 412
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 750 NEEDSDGSGQGAEPEEFQDSGE 685
+EED DGSG G E+ +D E
Sbjct: 65 DEEDDDGSGSGGPEEDVEDPNE 86
>AC006689-1|AAF39971.2| 257|Caenorhabditis elegans Hypothetical
protein T22E7.2 protein.
Length = 257
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 177 SLCVDCDPVFRLWGNNCHGCQHSTQNTHMYICVKLFHLIPLG*ISVIMLCHQFSTSSVHQ 356
+ C+D +W NNC G ++ + ICV +F + G +SV++ + T+S +
Sbjct: 57 NFCIDDFDHHCVWLNNCIGGKNYRPFVVLVICVNVFSMFCFG-LSVVIF-FSWITNSDER 114
Query: 357 VLI 365
LI
Sbjct: 115 ALI 117
>Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical
protein W07G1.5b protein.
Length = 450
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 747 EEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPA 649
EE+ +G+G + EE +D ED D EP+
Sbjct: 360 EEEDEGNGDEDDDEEVEDDEEDAGSDEAEEEPS 392
>Z82076-4|CAB04937.2| 438|Caenorhabditis elegans Hypothetical
protein W07G1.5a protein.
Length = 438
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 747 EEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPA 649
EE+ +G+G + EE +D ED D EP+
Sbjct: 348 EEEDEGNGDEDDDEEVEDDEEDAGSDEAEEEPS 380
>U41534-4|AAB47596.1| 323|Caenorhabditis elegans Hypothetical
protein C16A3.6 protein.
Length = 323
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = -1
Query: 747 EEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNNTXKK 592
+ DS+ +E +DS ED D +K+V K P T KK
Sbjct: 241 DTDSENEDNWQPEQEQEDSDEDDEEGGDEPMEIEEPPKKKVKKEPKKKTGKK 292
>AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical
protein R119.5 protein.
Length = 659
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = -1
Query: 753 LNEEDSDGSGQGAEPEEFQDSGEDWTPDAD-----SNEPASRTSRKRVSKPPVNNTXKK 592
L+E++ + S EP+E + + D S +PAS TSR+R + P + + KK
Sbjct: 530 LSEDEQELSDALEEPQESPSTSTESQVSEDEEPCCSTDPASTTSRRRRIRSPKSESAKK 588
>AF026207-1|AAB71266.1| 522|Caenorhabditis elegans Hypothetical
protein H42K12.3 protein.
Length = 522
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = -1
Query: 744 EDSDGSGQGAEPEEFQDS----GEDWTPDADSNEPASRTSR 634
EDS S + EP+E +++ DWTP SNE R R
Sbjct: 365 EDSADSSRAIEPQEPEETYFSDWSDWTPCTKSNERQVRRRR 405
>AC006662-5|AAF39894.1| 501|Caenorhabditis elegans Hypothetical
protein H23L24.2 protein.
Length = 501
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Frame = -1
Query: 288 NGRVLHKCTCVYSG----WNVDNRDNYYPITEILDRNPRTDSQ 172
N R+L + CVY+ WN N D PI D N + D Q
Sbjct: 65 NRRLLCRAVCVYAAGLDLWNSKNNDGKTPIEMTDDANIKRDLQ 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,028,508
Number of Sequences: 27780
Number of extensions: 325083
Number of successful extensions: 1224
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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