Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_K19
         (663 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55857-8|AAA98034.1|  145|Caenorhabditis elegans Dnaj domain (pr...    49   3e-06
Z72512-4|CAA96666.1|  328|Caenorhabditis elegans Hypothetical pr...    28   5.1  

>U55857-8|AAA98034.1|  145|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 15 protein.
          Length = 145

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 30/122 (24%), Positives = 56/122 (45%)
 Frame = -3

Query: 505 PS*YVHRVKEEQEISEKYSSLVNEAYKTLLEPLARGIYMLQLRGKDIPEKTEVDQKFLMK 326
           P  +V    EE+++SE++S  +NEAYK L +P  R  Y+++  G++ PE  + + + LM+
Sbjct: 16  PDKFVMATDEEKKLSEEHSRKLNEAYKELADPFKRAKYLIKEYGEEHPENLQ-NSEILME 74

Query: 325 IMXXXXXXXXXXXXXXXXXXXXXXXNKIQSLQKQLSTAFFEGDLKRVTKLLTQLKYYTSI 146
           ++                        +I    +QL T F    +     ++ +L Y  S+
Sbjct: 75  MLERNEEIDEMHDENALKAEKSRIETEIDEQLEQLGTHFESKKIPEARDVIGRLTYLYSL 134

Query: 145 DN 140
            N
Sbjct: 135 KN 136


>Z72512-4|CAA96666.1|  328|Caenorhabditis elegans Hypothetical
           protein R07B5.6 protein.
          Length = 328

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 48  NHIIVLRXFFNSIFQFCXLLLPFL 119
           NH + L  FF   F +C L+LP L
Sbjct: 102 NHFLNLIFFFTFYFNYCILILPLL 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,226,662
Number of Sequences: 27780
Number of extensions: 183506
Number of successful extensions: 414
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)