Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_K14
(771 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 456 e-129
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 89 2e-18
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 79 5e-15
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 74 1e-13
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 42 5e-04
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 42 5e-04
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 42 5e-04
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 29 2.8
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 29 3.7
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 29 4.8
U23513-1|ABD94110.1| 294|Caenorhabditis elegans Hypothetical pr... 29 4.8
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 28 8.5
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 8.5
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase subunit
protein 2 protein.
Length = 538
Score = 456 bits (1124), Expect = e-129
Identities = 223/252 (88%), Positives = 234/252 (92%)
Frame = -3
Query: 769 EPXGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 590
EP GARARV LTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP
Sbjct: 283 EPPGARARVCLTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 342
Query: 589 TLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 410
TLATDMG+MQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR IAEL
Sbjct: 343 TLATDMGSMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELA 402
Query: 409 IYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLT 230
IYPAVDPLDSTSRIMDPN++G HY++ARGVQKILQDYKSLQDIIAILGMDELSEEDKLT
Sbjct: 403 IYPAVDPLDSTSRIMDPNVVGQNHYDIARGVQKILQDYKSLQDIIAILGMDELSEEDKLT 462
Query: 229 VARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAXYMVGPI 50
V+RARKIQRFLSQPFQVAEVFTGH GK V LEETI+GF+ IL G+ DHLPEVA YM G I
Sbjct: 463 VSRARKIQRFLSQPFQVAEVFTGHQGKFVSLEETIRGFTMILKGELDHLPEVAFYMQGGI 522
Query: 49 EEVVAKAETLAK 14
++V KAE LAK
Sbjct: 523 DDVFKKAEELAK 534
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 89.4 bits (212), Expect = 2e-18
Identities = 68/240 (28%), Positives = 116/240 (48%), Gaps = 14/240 (5%)
Frame = -3
Query: 766 PXGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 587
P AR TG+T+AEYFRD G +V + D+ R+ +A E+S LG +P+ GY
Sbjct: 308 PVAAREASIYTGITLAEYFRDM-GLNVAMMADSTSRWAEALREISGRLGEMPADSGYPAY 366
Query: 586 LATDMGTMQERITTTK-------KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 428
LA + + ER K +GS+T V A+ P D DP + T + L +
Sbjct: 367 LAARLASFYERAGRVKCLGSPEREGSVTIVGAVSPPGGDFADPVTSATLGIVQVFWGLDK 426
Query: 427 AIAELGIYPAVDPLDSTSRIM-------DPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 269
+A+ +P+++ L S S M + N E ++ ++ILQ+ + L +I+ +
Sbjct: 427 KLAQRKHFPSINWLISYSEYMRALEEFYEKNY--PEFVSLRTKCKEILQEEEDLSEIVQL 484
Query: 268 LGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYD 89
+G L+E DK+T+ ++ + + F +T + + P +T+ G K + G YD
Sbjct: 485 VGKASLAESDKVTL----EVAKIIKDDFLQQNGYTKY-DRFCPFYKTV-GMLKNMIGFYD 538
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 78.6 bits (185), Expect = 5e-15
Identities = 51/187 (27%), Positives = 96/187 (51%), Gaps = 7/187 (3%)
Frame = -3
Query: 730 LTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI 551
LT AE+F G+ VL+ + ++ + +A E+SA +P G+ + TD+ T+ ER
Sbjct: 271 LTAAEFFAYHCGKHVLVVLTDMSSYAEALREISAAREEVPGRRGFPGYMYTDLATIYERA 330
Query: 550 TTTK--KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDST 377
K +GSIT + + +P +D+T P P T + + + + + IYP +D L S
Sbjct: 331 GRVKGREGSITQIPILTMPNNDITHPIPDLTGYITEGQIYIDKQLHKRLIYPPIDVLPSL 390
Query: 376 SRIM----DPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKI 209
SR+M + +H +++ + K +Q + A++G++ LS +D L + K
Sbjct: 391 SRLMKSAVGEGMTREDHSDLSNQLYACYAMGKDVQAMKAVVGVEALSPDDLLYLEFLAKF 450
Query: 208 QR-FLSQ 191
++ F++Q
Sbjct: 451 EKNFIAQ 457
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 73.7 bits (173), Expect = 1e-13
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 7/187 (3%)
Frame = -3
Query: 730 LTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI 551
LT AE+ Q + VL+ + ++ + +A EVSA +P G+ + TD+ T+ ER
Sbjct: 259 LTSAEFLAYQCKKHVLVVLTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERA 318
Query: 550 TTT--KKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDST 377
+ GSIT + + +P DD+T P P T + + R + IYP ++ L S
Sbjct: 319 GRVEGRDGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRLIYPPINVLPSL 378
Query: 376 SRIMDPNI----IGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKI 209
SR+M I +H +V+ + K +Q + A++G + LS +D L + K
Sbjct: 379 SRLMKSAIGEGMTREDHSDVSNQLYACYAIGKDVQAMKAVVGEEALSSDDLLYLEFLTKF 438
Query: 208 QR-FLSQ 191
++ F++Q
Sbjct: 439 EKNFITQ 445
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 41.9 bits (94), Expect = 5e-04
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Frame = -3
Query: 736 TGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQE 557
+G + E+FRD G+ L+ D++ + A ++S LL R P Y + + E
Sbjct: 250 SGCAMGEHFRDN-GKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 308
Query: 556 RITTTKK----GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDP 389
R GS+T++ I A D++ P + D L + G+ PA++
Sbjct: 309 RAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINV 368
Query: 388 LDSTSRI 368
S SR+
Sbjct: 369 GLSVSRV 375
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 41.9 bits (94), Expect = 5e-04
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Frame = -3
Query: 736 TGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQE 557
+G + E+FRD G+ L+ D++ + A ++S LL R P Y + + E
Sbjct: 242 SGCAMGEHFRDN-GKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300
Query: 556 RITTTKK----GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDP 389
R GS+T++ I A D++ P + D L + G+ PA++
Sbjct: 301 RAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINV 360
Query: 388 LDSTSRI 368
S SR+
Sbjct: 361 GLSVSRV 367
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 41.9 bits (94), Expect = 5e-04
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Frame = -3
Query: 736 TGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQE 557
+G + E+FRD G+ L+ D++ + A ++S LL R P Y + + E
Sbjct: 277 SGCAMGEHFRDN-GKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 335
Query: 556 RITTTKK----GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDP 389
R GS+T++ I A D++ P + D L + G+ PA++
Sbjct: 336 RAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINV 395
Query: 388 LDSTSRI 368
S SR+
Sbjct: 396 GLSVSRV 402
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = -3
Query: 598 YQPTLATDMG--TMQERITTTKKGSITSVQ-AIYVPADDLTDPAPATTFAHLDATTV 437
Y PT T T+ TTT+ + T+V+ A +T P P TT + TTV
Sbjct: 146 YDPTATTSAAPTTIPPTTTTTRAPTTTTVRKTTQTTATTMTTPKPTTTVSTTTTTTV 202
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/112 (23%), Positives = 45/112 (40%)
Frame = -3
Query: 580 TDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYP 401
T+ T +E TTT + T+ P + T+P+P T A +TT + +E
Sbjct: 482 TEAPTTEEPTTTTTEEPTTTTTT-EEPTEAPTEPSPTTVEATEASTTPEASTSSETSTTE 540
Query: 400 AVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSE 245
+P TS + P E + DY L ++ + D++S+
Sbjct: 541 NSEPNQKTSTPVAPEASTVEEETITPIKCVDYGDYCRLWGVLQLCYRDQVSK 592
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = -3
Query: 589 TLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 410
T+AT + TTTK + T++ + T P P TT + TT +R IA
Sbjct: 173 TVATTKTSPSTLRTTTKPPTTTTIATTRITTKTTTSPPPFTT--TVTTTTSAARTIATTT 230
Query: 409 IYPAVDPLDSTSRIMDP 359
V P+ + + P
Sbjct: 231 PIKTVPPVKVFGKAIKP 247
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = -3
Query: 592 PTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAEL 413
PT T T + TTT + + P T PAP TT TT+ + A L
Sbjct: 419 PTTTTTTTTTPKPTTTTTTTTTPAPTTTQKPTTTTTTPAPTTTSTTSIPTTIATTTAAPL 478
>U23513-1|ABD94110.1| 294|Caenorhabditis elegans Hypothetical
protein D2021.4a protein.
Length = 294
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -3
Query: 376 SRIMDPNIIGAEHYN-VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRF 200
++I D N+I + HYN V+ G + L D K ++ + + D E K+ +A + +F
Sbjct: 56 NKIKDENVIFSMHYNFVSAGDPRKLIDIK-IEKVGNVYTADVYHENKKIGLAHIKTDSKF 114
Query: 199 LSQ-PF 185
L + PF
Sbjct: 115 LRKIPF 120
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 506 INSL-YRCDGTFLGGGNSFLHSTHVSSQSRLISYS 607
INSL + GTFLG G + HV S S ++S S
Sbjct: 426 INSLSFDMTGTFLGIGGQKVQVLHVKSWSEVVSLS 460
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = -3
Query: 637 VSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFA 458
VS+ ++P QPT+++++G + + T K+ +I V+ P+ P T
Sbjct: 1332 VSSFAPKVPETKINQPTISSNIGDLSK---TEKESTIPRVEV--TPS---ASPESTTVTE 1383
Query: 457 HLDATTVLSRAIAELGIYPA 398
H+DA T S I +G P+
Sbjct: 1384 HIDAET-NSATIPTIGTPPS 1402
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,941,128
Number of Sequences: 27780
Number of extensions: 376105
Number of successful extensions: 1082
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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