Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_K08
         (799 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    23   3.3  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    23   3.3  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    23   4.3  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    23   4.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   4.3  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   5.7  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   5.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   5.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   5.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   5.7  

>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 406 KYLSRICPTLFLYLLASAVRVGSS 477
           KY++ +   LFL++   AV VG++
Sbjct: 512 KYVAMVLDRLFLWIFTLAVLVGTA 535


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 406 KYLSRICPTLFLYLLASAVRVGSS 477
           KY++ +   LFL++   AV VG++
Sbjct: 512 KYVAMVLDRLFLWIFTLAVLVGTA 535


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 406 KYLSRICPTLFLYLLASAVRVGSS 477
           KY++ +   LFL++   AV VG++
Sbjct: 507 KYVAMVLDRLFLWIFTLAVVVGTA 530


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 557 LGIAVMAYSPFGFV 516
           +GI +M YSPFG +
Sbjct: 279 VGIIIMWYSPFGIM 292


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -3

Query: 623 VINQIEVNPTNTQEPLVAHCQSLGIAVMAYSPFGFVVSRGQTGAPPPR 480
           V++Q+E+     ++ L A    L +A    SP     S   TG+  P+
Sbjct: 322 VVSQLEIQLQKERDRLTAMMHHLHVAKQMASPEPPKSSESSTGSSIPK 369


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -1

Query: 772 LTILLITSTIWKPGKACRTRGSWV 701
           L  LLIT  I  P   C TR S+V
Sbjct: 6   LLSLLITCLICSPSVHCGTRPSFV 29


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +3

Query: 618 NNRPDVTVADQSRDLRSVEVGYS 686
           +NRP++   D+++DL SV   ++
Sbjct: 675 SNRPNLLFKDEAKDLVSVNKSWN 697


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +3

Query: 618 NNRPDVTVADQSRDLRSVEVGYS 686
           +NRP++   D+++DL SV   ++
Sbjct: 675 SNRPNLLFKDEAKDLVSVNKSWN 697


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +3

Query: 618 NNRPDVTVADQSRDLRSVEVGYS 686
           +NRP++   D+++DL SV   ++
Sbjct: 675 SNRPNLLFKDEAKDLVSVNKSWN 697


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 314 EEVAAINQFNKNHRVIDIS 258
           E V+ +  F+KN+ ++DIS
Sbjct: 501 EAVSLLINFSKNNTIVDIS 519


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,385
Number of Sequences: 438
Number of extensions: 4578
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)