Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_K05
(356 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68213-4|CAA92441.1| 73|Caenorhabditis elegans Hypothetical pr... 71 2e-13
AF202929-1|AAK69379.1| 73|Caenorhabditis elegans Nx protein. 71 2e-13
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 34 0.025
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 34 0.025
U49941-10|AAB53870.1| 73|Caenorhabditis elegans Hypothetical p... 30 0.41
U22832-3|AAA64508.2| 359|Caenorhabditis elegans Hypothetical pr... 30 0.41
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 29 0.95
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 29 0.95
Z92786-1|CAB07203.1| 250|Caenorhabditis elegans Hypothetical pr... 28 1.7
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 28 2.2
AL132948-46|CAD31837.2| 473|Caenorhabditis elegans Hypothetical... 28 2.2
AL023847-8|CAI46616.1| 262|Caenorhabditis elegans Hypothetical ... 27 2.9
Z81589-3|CAB04719.1| 256|Caenorhabditis elegans Hypothetical pr... 26 6.7
Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical pr... 26 6.7
Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical pr... 26 6.7
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 26 6.7
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 26 6.7
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 26 6.7
Z71178-16|CAD44088.1| 328|Caenorhabditis elegans Hypothetical p... 26 6.7
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 26 6.7
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 26 6.7
U23525-7|AAC46569.1| 557|Caenorhabditis elegans Yeast smf (diva... 26 6.7
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 26 6.7
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 26 6.7
AL021478-2|CAF32232.1| 328|Caenorhabditis elegans Hypothetical ... 26 6.7
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 26 6.7
AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc ... 26 6.7
Z92973-3|CAB07491.1| 244|Caenorhabditis elegans Hypothetical pr... 26 8.9
Z81097-17|CAF31479.2| 269|Caenorhabditis elegans Hypothetical p... 26 8.9
Z70757-1|CAA94805.1| 497|Caenorhabditis elegans Hypothetical pr... 26 8.9
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 26 8.9
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 26 8.9
U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical pr... 26 8.9
U40414-1|AAA81404.2| 543|Caenorhabditis elegans Hypothetical pr... 26 8.9
AF045646-4|AAK29837.2| 295|Caenorhabditis elegans Hypothetical ... 26 8.9
AF045646-3|AAK29836.2| 432|Caenorhabditis elegans Hypothetical ... 26 8.9
AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical ... 26 8.9
>Z68213-4|CAA92441.1| 73|Caenorhabditis elegans Hypothetical
protein C01F6.9 protein.
Length = 73
Score = 71.3 bits (167), Expect = 2e-13
Identities = 37/68 (54%), Positives = 39/68 (57%)
Frame = -3
Query: 207 MARGHQKIXXXXXXXXXXXXXXXXQGHSATDQKKAAQKALVHVCVVCKAQMPDPKTYKQH 28
MARG QKI + DQK AA KAL H C VC A MPDPKTYKQH
Sbjct: 1 MARGQQKIQSQQKNQKKADAARK----AGIDQKAAAAKALNHKCTVCLAMMPDPKTYKQH 56
Query: 27 FENKHPKN 4
FENKHPK+
Sbjct: 57 FENKHPKS 64
>AF202929-1|AAK69379.1| 73|Caenorhabditis elegans Nx protein.
Length = 73
Score = 71.3 bits (167), Expect = 2e-13
Identities = 37/68 (54%), Positives = 39/68 (57%)
Frame = -3
Query: 207 MARGHQKIXXXXXXXXXXXXXXXXQGHSATDQKKAAQKALVHVCVVCKAQMPDPKTYKQH 28
MARG QKI + DQK AA KAL H C VC A MPDPKTYKQH
Sbjct: 1 MARGQQKIQSQQKNQKKADAARK----AGIDQKAAAAKALNHKCTVCLAMMPDPKTYKQH 56
Query: 27 FENKHPKN 4
FENKHPK+
Sbjct: 57 FENKHPKS 64
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 34.3 bits (75), Expect = 0.025
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 84 HVCVVCKAQMPDPKTYKQHFENKH 13
HVCV+C QMP T ++H E +H
Sbjct: 336 HVCVLCNHQMPKTVTVQEHMEKEH 359
Score = 33.9 bits (74), Expect = 0.034
Identities = 9/24 (37%), Positives = 19/24 (79%)
Frame = -3
Query: 84 HVCVVCKAQMPDPKTYKQHFENKH 13
H+C++C ++P+ +T ++H +NKH
Sbjct: 39 HMCLLCNRRIPENETLREHMKNKH 62
Score = 30.7 bits (66), Expect = 0.31
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = -3
Query: 84 HVCVVCKAQMPDPKTYKQHFENKH 13
H C++C Q+P+ +T + H +++H
Sbjct: 206 HTCLLCNRQIPENETVRDHMKSQH 229
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 34.3 bits (75), Expect = 0.025
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 84 HVCVVCKAQMPDPKTYKQHFENKH 13
HVCV+C QMP T ++H E +H
Sbjct: 336 HVCVLCNHQMPKTVTVQEHMEKEH 359
Score = 33.9 bits (74), Expect = 0.034
Identities = 9/24 (37%), Positives = 19/24 (79%)
Frame = -3
Query: 84 HVCVVCKAQMPDPKTYKQHFENKH 13
H+C++C ++P+ +T ++H +NKH
Sbjct: 39 HMCLLCNRRIPENETLREHMKNKH 62
Score = 30.7 bits (66), Expect = 0.31
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = -3
Query: 84 HVCVVCKAQMPDPKTYKQHFENKH 13
H C++C Q+P+ +T + H +++H
Sbjct: 206 HTCLLCNRQIPENETVRDHMKSQH 229
>U49941-10|AAB53870.1| 73|Caenorhabditis elegans Hypothetical
protein K10B3.1a protein.
Length = 73
Score = 30.3 bits (65), Expect = 0.41
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -3
Query: 207 MARGHQKIXXXXXXXXXXXXXXXXQGHSATDQKKAAQKALVHVCVVC 67
MARGHQK G +DQK AA +L H C VC
Sbjct: 1 MARGHQKALSQQRNAEKTAKAKKAVG---SDQKNAAMASLHHKCTVC 44
>U22832-3|AAA64508.2| 359|Caenorhabditis elegans Hypothetical
protein C09F5.3 protein.
Length = 359
Score = 30.3 bits (65), Expect = 0.41
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 84 HVCVVCKAQMPDPKTYKQHFENKHPK 7
H+C +C + P P+ HF H K
Sbjct: 183 HICSICDSAFPSPQAQSVHFAEAHKK 208
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 29.1 bits (62), Expect = 0.95
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 211 HNGSRTPENSVTS*SCGKDVQNEETAGAQCHRPEESCTKG-TC 86
H+G +PE + + GK ++E T +P ESCT+G TC
Sbjct: 759 HDGCVSPEEAARRKARGK-ARHEATTARLYSKPGESCTQGQTC 800
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 29.1 bits (62), Expect = 0.95
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 211 HNGSRTPENSVTS*SCGKDVQNEETAGAQCHRPEESCTKG-TC 86
H+G +PE + + GK ++E T +P ESCT+G TC
Sbjct: 856 HDGCVSPEEAARRKARGK-ARHEATTARLYSKPGESCTQGQTC 897
>Z92786-1|CAB07203.1| 250|Caenorhabditis elegans Hypothetical
protein F47H4.1 protein.
Length = 250
Score = 28.3 bits (60), Expect = 1.7
Identities = 10/40 (25%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 129 HSAT-DQKKAAQKALVHVCVVCKAQMPDPKTYKQHFENKH 13
HSA+ ++ + + H C++C+ + +T ++H N+H
Sbjct: 36 HSASLNRHRQLMHSNEHTCMMCERALNQKETIREHMRNEH 75
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 27.9 bits (59), Expect = 2.2
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 9/67 (13%)
Frame = +2
Query: 59 WALQTTQTWTSAFCAAFFWSVALCPCC-----FFILDIFSAALAC----D*IFWCPRAIV 211
W + +S F + S AL PC + LD L+C + IF CP ++V
Sbjct: 285 WNVDECDLESSGFMENYKASEALTPCTNMDNGLYALDCTPRVLSCQNGRENIFECPPSLV 344
Query: 212 YSENVVL 232
++EN ++
Sbjct: 345 FNENSLI 351
>AL132948-46|CAD31837.2| 473|Caenorhabditis elegans Hypothetical
protein Y39B6A.27 protein.
Length = 473
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +2
Query: 14 CLFSKCCL*VLGSGIWALQTTQTWTSAFCAAFFWSVALCPCCFF 145
C S CC+ + S I AL + +F A + C CFF
Sbjct: 368 CGMSDCCINSVRSVICALVMPSRRSQSFAVARMYHAFACTICFF 411
>AL023847-8|CAI46616.1| 262|Caenorhabditis elegans Hypothetical
protein Y57A10C.11 protein.
Length = 262
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 29 CCL*VLGSG-IWALQTTQTWTSAFCAAFFWSVALCPCCFFILDI 157
CCL +GSG +W + + W F+W L P L+I
Sbjct: 55 CCL--VGSGWMWVVDNKRKWYIRSIRRFYWHRILMPTAVVCLNI 96
>Z81589-3|CAB04719.1| 256|Caenorhabditis elegans Hypothetical
protein T08G5.7 protein.
Length = 256
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -3
Query: 78 CVVCKAQMPDPKTYKQHFENKHPK 7
C VC+ +P K K H KH K
Sbjct: 79 CPVCELVIPTEKGLKNHMNQKHRK 102
>Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical
protein F58G1.2 protein.
Length = 445
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -3
Query: 126 SATDQKKAAQKALVHVCVVCKAQMPDPKTYKQHFENKHPK 7
S + + A +K++ C VCK + + ++H + HPK
Sbjct: 99 SIDEIRNAVRKSMFR-CKVCKNRFGEMSLLERHLRDSHPK 137
>Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical
protein M04B2.1 protein.
Length = 870
Score = 26.2 bits (55), Expect = 6.7
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = -3
Query: 102 AQKALVHVCVVCKAQMPDPKTYKQHFENKH 13
+ A VC +C A + + + Y QH + H
Sbjct: 707 SSSAPTFVCEICDASVQEKEKYLQHLQTTH 736
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -3
Query: 123 ATDQKKAAQKALVHVCVVCKAQMPDPKTYKQHFENKHPK 7
A Q K +++ C VC + +T + H + HPK
Sbjct: 813 ADHQVKLCSAEIMYSCDVCAFKCSSYQTLEAHLTSNHPK 851
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2
Query: 196 TPENSVTS*SCGKDVQNEETAGAQCHRPEESCTKGTCP 83
T E + G D+ + A +CH+ E+ C CP
Sbjct: 147 TKEERLVMVEKGSDIPGKCCAYYECHKKEKKCENVHCP 184
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2
Query: 196 TPENSVTS*SCGKDVQNEETAGAQCHRPEESCTKGTCP 83
T E + G D+ + A +CH+ E+ C CP
Sbjct: 81 TKEERLVMVEKGSDIPGKCCAYYECHKKEKKCENVHCP 118
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2
Query: 196 TPENSVTS*SCGKDVQNEETAGAQCHRPEESCTKGTCP 83
T E + G D+ + A +CH+ E+ C CP
Sbjct: 81 TKEERLVMVEKGSDIPGKCCAYYECHKKEKKCENVHCP 118
>Z71178-16|CAD44088.1| 328|Caenorhabditis elegans Hypothetical
protein B0024.14c protein.
Length = 328
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2
Query: 196 TPENSVTS*SCGKDVQNEETAGAQCHRPEESCTKGTCP 83
T E + G D+ + A +CH+ E+ C CP
Sbjct: 81 TKEERLVMVEKGSDIPGKCCAYYECHKKEKKCENVHCP 118
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2
Query: 196 TPENSVTS*SCGKDVQNEETAGAQCHRPEESCTKGTCP 83
T E + G D+ + A +CH+ E+ C CP
Sbjct: 147 TKEERLVMVEKGSDIPGKCCAYYECHKKEKKCENVHCP 184
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2
Query: 196 TPENSVTS*SCGKDVQNEETAGAQCHRPEESCTKGTCP 83
T E + G D+ + A +CH+ E+ C CP
Sbjct: 81 TKEERLVMVEKGSDIPGKCCAYYECHKKEKKCENVHCP 118
>U23525-7|AAC46569.1| 557|Caenorhabditis elegans Yeast smf
(divalent cation transporter)homolog protein 1, isoform
a protein.
Length = 557
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +2
Query: 5 FLGCLFSKCCL*VLGSGIWALQTTQTWTSAFCAAF 109
+LGC F + + G GI+A + T T + F
Sbjct: 344 YLGCQFGAIAMFIWGIGIFAAGQSSTMTGTYTGQF 378
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2
Query: 196 TPENSVTS*SCGKDVQNEETAGAQCHRPEESCTKGTCP 83
T E + G D+ + A +CH+ E+ C CP
Sbjct: 81 TKEERLVMVEKGSDIPGKCCAYYECHKKEKKCENVHCP 118
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2
Query: 196 TPENSVTS*SCGKDVQNEETAGAQCHRPEESCTKGTCP 83
T E + G D+ + A +CH+ E+ C CP
Sbjct: 81 TKEERLVMVEKGSDIPGKCCAYYECHKKEKKCENVHCP 118
>AL021478-2|CAF32232.1| 328|Caenorhabditis elegans Hypothetical
protein B0024.14c protein.
Length = 328
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2
Query: 196 TPENSVTS*SCGKDVQNEETAGAQCHRPEESCTKGTCP 83
T E + G D+ + A +CH+ E+ C CP
Sbjct: 81 TKEERLVMVEKGSDIPGKCCAYYECHKKEKKCENVHCP 118
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2
Query: 196 TPENSVTS*SCGKDVQNEETAGAQCHRPEESCTKGTCP 83
T E + G D+ + A +CH+ E+ C CP
Sbjct: 81 TKEERLVMVEKGSDIPGKCCAYYECHKKEKKCENVHCP 118
>AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc
finger protein protein.
Length = 870
Score = 26.2 bits (55), Expect = 6.7
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = -3
Query: 102 AQKALVHVCVVCKAQMPDPKTYKQHFENKH 13
+ A VC +C A + + + Y QH + H
Sbjct: 707 SSSAPTFVCEICDASVQEKEKYLQHLQTTH 736
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -3
Query: 123 ATDQKKAAQKALVHVCVVCKAQMPDPKTYKQHFENKHPK 7
A Q K +++ C VC + +T + H + HPK
Sbjct: 813 ADHQVKLCSAEIMYSCDVCAFKCSSYQTLEAHLTSNHPK 851
>Z92973-3|CAB07491.1| 244|Caenorhabditis elegans Hypothetical
protein Y6G8.3 protein.
Length = 244
Score = 25.8 bits (54), Expect = 8.9
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -3
Query: 84 HVCVVCKAQMPDPKTYKQHFENKH 13
H C++C ++ +T + H N+H
Sbjct: 52 HTCMMCDRKLNAKETIRDHMRNEH 75
>Z81097-17|CAF31479.2| 269|Caenorhabditis elegans Hypothetical
protein K07A1.16 protein.
Length = 269
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 47 GSGIWALQTTQTWTSAFCAAFFWSVALCPCCFFILDIFSAA 169
G ++ +Q + S F A FWS+ + P +LD S +
Sbjct: 107 GIYVFLVQLAAAYLSYFVARLFWSIGVHPIHLELLDAESCS 147
>Z70757-1|CAA94805.1| 497|Caenorhabditis elegans Hypothetical
protein ZK287.1 protein.
Length = 497
Score = 25.8 bits (54), Expect = 8.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 139 TAGAQCHRPEESCTKGTCPC 80
T+G QC + ++ C K C C
Sbjct: 112 TSGCQCAKGKKQCVKKECAC 131
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
F57F4.4 protein.
Length = 2090
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = -2
Query: 214 VHNGSRTPENSVTS*SCGKDVQNEETAGAQCHRPEESCTKG 92
VHN +PE VT+ C D + G P C G
Sbjct: 1066 VHNNCTSPEAGVTACCCDSDACLDPNRGKTVPTPPLKCYVG 1106
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = -2
Query: 214 VHNGSRTPENSVTS*SCGKDVQNEETAGAQCHRPEESCTKG 92
VHN +PE VT+ C D + G P C G
Sbjct: 1066 VHNNCTSPEAGVTACCCDSDACLDPNRGKTVPTPPLKCYVG 1106
>U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical
protein C52E12.1 protein.
Length = 925
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
Frame = -3
Query: 99 QKALVHVCVVCKA------QMPDPKTYKQHFENKHPKN 4
+K L HVC +CK + P + +QH ++H ++
Sbjct: 176 EKYLAHVCKICKTDDGERLEFPSFMSLRQHMASRHEQS 213
>U40414-1|AAA81404.2| 543|Caenorhabditis elegans Hypothetical
protein F53B3.1 protein.
Length = 543
Score = 25.8 bits (54), Expect = 8.9
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -3
Query: 111 KKAAQKALVHVCVVCKAQMPDPKTYKQHFENKHP 10
+K ++ +V C CK + + Y++H +KHP
Sbjct: 210 RKLIRQKMVR-CKKCKNRFIEKNIYERHLRDKHP 242
>AF045646-4|AAK29837.2| 295|Caenorhabditis elegans Hypothetical
protein F56B3.2b protein.
Length = 295
Score = 25.8 bits (54), Expect = 8.9
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = -2
Query: 190 ENSVTS*SCGKDVQNEETAGAQCHRPEES-CTKGTCPCLCG 71
EN SC K V Q P+ S C +G C C CG
Sbjct: 198 ENLSKDTSCMKAVPLNSLCFIQKQCPQNSGCYRGRCMCRCG 238
>AF045646-3|AAK29836.2| 432|Caenorhabditis elegans Hypothetical
protein F56B3.2a protein.
Length = 432
Score = 25.8 bits (54), Expect = 8.9
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = -2
Query: 190 ENSVTS*SCGKDVQNEETAGAQCHRPEES-CTKGTCPCLCG 71
EN SC K V Q P+ S C +G C C CG
Sbjct: 335 ENLSKDTSCMKAVPLNSLCFIQKQCPQNSGCYRGRCMCRCG 375
>AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical
protein Y48G8AL.10 protein.
Length = 976
Score = 25.8 bits (54), Expect = 8.9
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
Frame = -3
Query: 129 HSATDQKKAAQKALV----HVCVVCKAQMPDPKTYKQH 28
H TD K K L HVC CK + D K ++H
Sbjct: 427 HLRTDTLKIPTKPLPIYKRHVCKTCKREFRDAKMLEKH 464
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,842,112
Number of Sequences: 27780
Number of extensions: 140855
Number of successful extensions: 434
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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