Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_K05
         (356 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   0.82 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   1.9  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    22   2.5  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    22   2.5  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    22   2.5  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              21   5.8  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   5.8  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    20   7.6  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     20   7.6  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 0.82
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 95  RHLSMFVWFVRPRCLTLRLTNSILRTNTL 9
           R +S +  F RP  +TL     + R NTL
Sbjct: 327 REISTYFTFTRPCGITLTFHEILKRANTL 355


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +3

Query: 99  VQLSSGRWHCAPAVSSFWTS 158
           +QL+ G W   P +   W S
Sbjct: 97  LQLTGGTWELGPMLCDSWVS 116


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 119 VALCPCCFFILDIFS 163
           +AL P CF + ++FS
Sbjct: 6   IALVPVCFLLGEVFS 20


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 119 VALCPCCFFILDIFS 163
           +AL P CF + ++FS
Sbjct: 6   IALVPVCFLLGEVFS 20


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
          finger domain-Z3 isoform protein.
          Length = 92

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -3

Query: 78 CVVCKAQMPDPKTYKQHFENKHPKN 4
          C  C+       + K+HF++KH ++
Sbjct: 8  CPYCRRNFSCYYSLKRHFQDKHEQS 32


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 128 TVPPTRRKLHK 96
           T+ P RRK HK
Sbjct: 40  TIEPRRRKFHK 50


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 31  LFVSLRVRHLGLTNHTNMDKCLLC 102
           ++VSL    + +  HT   KC LC
Sbjct: 25  VYVSLGALKMHIRTHTLPCKCHLC 48


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 63  PYKPHKHGQV 92
           PY+PH H  V
Sbjct: 108 PYRPHPHNLV 117


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 63  PYKPHKHGQV 92
           PY+PH H  V
Sbjct: 108 PYRPHPHNLV 117


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,429
Number of Sequences: 438
Number of extensions: 1732
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8308335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)