Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_K03
         (583 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L41147-1|AAA92622.1|  440|Homo sapiens 5-HT6 serotonin receptor ...    29   9.1  
BC074996-1|AAH74996.1|  440|Homo sapiens 5-hydroxytryptamine (se...    29   9.1  
BC074995-1|AAH74995.1|  440|Homo sapiens 5-hydroxytryptamine (se...    29   9.1  
AY429105-1|AAR07900.1|  440|Homo sapiens 5-hydroxytryptamine/ser...    29   9.1  
AL031727-13|CAI19020.1|  440|Homo sapiens 5-hydroxytryptamine (s...    29   9.1  

>L41147-1|AAA92622.1|  440|Homo sapiens 5-HT6 serotonin receptor
           protein.
          Length = 440

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 278 TSNQPLLLLFSPQVNHGTMVQVPIVITVCYGDWILS 171
           TSN  L+ LF+  +  G +V  P ++   YG W+L+
Sbjct: 60  TSNFFLVSLFTSDLMVGLVVMPPAMLNALYGRWVLA 95


>BC074996-1|AAH74996.1|  440|Homo sapiens 5-hydroxytryptamine
           (serotonin) receptor 6 protein.
          Length = 440

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 278 TSNQPLLLLFSPQVNHGTMVQVPIVITVCYGDWILS 171
           TSN  L+ LF+  +  G +V  P ++   YG W+L+
Sbjct: 60  TSNFFLVSLFTSDLMVGLVVMPPAMLNALYGRWVLA 95


>BC074995-1|AAH74995.1|  440|Homo sapiens 5-hydroxytryptamine
           (serotonin) receptor 6 protein.
          Length = 440

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 278 TSNQPLLLLFSPQVNHGTMVQVPIVITVCYGDWILS 171
           TSN  L+ LF+  +  G +V  P ++   YG W+L+
Sbjct: 60  TSNFFLVSLFTSDLMVGLVVMPPAMLNALYGRWVLA 95


>AY429105-1|AAR07900.1|  440|Homo sapiens
           5-hydroxytryptamine/serotonin receptor 6 protein.
          Length = 440

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 278 TSNQPLLLLFSPQVNHGTMVQVPIVITVCYGDWILS 171
           TSN  L+ LF+  +  G +V  P ++   YG W+L+
Sbjct: 60  TSNFFLVSLFTSDLMVGLVVMPPAMLNALYGRWVLA 95


>AL031727-13|CAI19020.1|  440|Homo sapiens 5-hydroxytryptamine
           (serotonin) receptor 6 protein.
          Length = 440

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 278 TSNQPLLLLFSPQVNHGTMVQVPIVITVCYGDWILS 171
           TSN  L+ LF+  +  G +V  P ++   YG W+L+
Sbjct: 60  TSNFFLVSLFTSDLMVGLVVMPPAMLNALYGRWVLA 95


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,930,618
Number of Sequences: 237096
Number of extensions: 1482835
Number of successful extensions: 2225
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2223
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)