Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_K03
         (583 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   3.8  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   3.8  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   3.8  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   6.7  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   6.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   6.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   8.9  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   8.9  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -2

Query: 132 LTSKKGHSFLIF*PKQDSYHRV*SCLF 52
           +  +KG   +++    DS+HR+ S  F
Sbjct: 205 IADEKGEGLIVYHNSDDSFHRLTSNTF 231


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -2

Query: 132 LTSKKGHSFLIF*PKQDSYHRV*SCLF 52
           +  +KG   +++    DS+HR+ S  F
Sbjct: 205 IADEKGEGLIVYHNSDDSFHRLTSNTF 231


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -2

Query: 132 LTSKKGHSFLIF*PKQDSYHRV*SCLF 52
           +  +KG   +++    DS+HR+ S  F
Sbjct: 205 IADEKGEGLIVYHNSDDSFHRLTSNTF 231


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -2

Query: 132 LTSKKGHSFLIF*PKQDSYHRV*SCLF 52
           +  +KG   +++    DS+HR+ S  F
Sbjct: 208 IADEKGEGLIMYQNSDDSFHRLTSNTF 234


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 65  EAAYFMLTKTSISYFIR 15
           + A++ML +  +SYF+R
Sbjct: 417 DPAFYMLYQNILSYFLR 433


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
 Frame = -2

Query: 327 NNYQLNTFQIFH---STDTYFEPTI 262
           NNYQ N   +FH    T+ + + T+
Sbjct: 16  NNYQSNMTSVFHQLLQTEAFVDVTL 40


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 65  EAAYFMLTKTSISYFIR 15
           + A++ML +  +SYF+R
Sbjct: 417 DPAFYMLYQKILSYFLR 433


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -2

Query: 132 LTSKKGHSFLIF*PKQDSYHRV*SCLF 52
           +   KG + +++    DS+HR+ S  F
Sbjct: 203 MADHKGDALIVYQNADDSFHRLTSNTF 229


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,963
Number of Sequences: 438
Number of extensions: 3412
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)