Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_J19
         (768 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    23   2.4  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    23   2.4  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.5  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   7.2  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   9.5  

>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 679 HCRSPWAKVTTNHQVSCMLVCLHGQYNKKTN 587
           H  +PW K    H +  +LV    QY  +TN
Sbjct: 339 HKMAPWVKRVFIHILPRLLVMRRPQYKFETN 369


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 679 HCRSPWAKVTTNHQVSCMLVCLHGQYNKKTN 587
           H  +PW K    H +  +LV    QY  +TN
Sbjct: 339 HKMAPWVKRVFIHILPRLLVMRRPQYKFETN 369


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 88  KNFDSIYLSIMRVMLSEQSXMYLYYFIVTIIN 183
           K FD  Y + +    +    MYLY   V +I+
Sbjct: 117 KTFDVFYNTAVWARFNVNEQMYLYALSVAVIH 148


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 88  KNFDSIYLSIMRVMLSEQSXMYLYYFIVTIIN 183
           K FD  Y + +    +    MYLY   V +I+
Sbjct: 117 KTFDVFYNTAVWARFNVNEQMYLYALSVAVIH 148


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 243 YYNDIKMDNVYWEFTKPFL 299
           YY+ +   ++Y+  TKPF+
Sbjct: 267 YYSPLSSRSLYYVNTKPFM 285


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 140 CSLNITLIIDKYIE 99
           CSLN+   +DK IE
Sbjct: 154 CSLNLETYLDKLIE 167


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,027
Number of Sequences: 438
Number of extensions: 5126
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)