Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_J16
(794 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0124 + 971213-971341,971741-971769,971877-972078,972839-97... 107 1e-23
06_03_0629 + 22920206-22920291,22920430-22920527,22920657-229207... 64 9e-11
05_01_0119 + 820566-820739,822708-822737,823153-823266,823341-82... 61 1e-09
01_06_0711 + 31388369-31388799,31388907-31389079,31389852-313899... 33 0.35
02_04_0605 - 24290777-24290830,24290914-24291075,24291494-242916... 30 2.4
01_06_0848 + 32426550-32426613,32427013-32427167,32428470-324285... 29 3.2
05_05_0024 + 21613199-21613208,21613466-21613560,21613656-216137... 29 4.3
10_08_0971 - 21949721-21949936,21950051-21950484,21950599-219507... 29 5.6
10_08_0353 - 17101261-17102244 29 5.6
03_02_0611 + 9842550-9843035,9844313-9844416,9844586-9844814,984... 29 5.6
11_04_0142 + 14027726-14029081 28 7.4
04_03_0658 + 18447986-18448117,18448204-18448317,18448388-184485... 28 7.4
02_05_0466 + 29278009-29278575 28 7.4
12_02_0178 - 14941342-14941391,14941909-14942002,14942498-149427... 28 9.8
02_03_0415 + 18805541-18805610,18805962-18806128,18806616-188066... 28 9.8
01_07_0288 + 42534552-42534558,42535302-42537280,42537367-425375... 28 9.8
>03_01_0124 +
971213-971341,971741-971769,971877-972078,972839-973081,
973172-973273,973743-974180
Length = 380
Score = 107 bits (256), Expect = 1e-23
Identities = 57/170 (33%), Positives = 102/170 (60%), Gaps = 3/170 (1%)
Frame = -1
Query: 791 QXIFKSCKLIPVMIGSIII--MRXRYSFXDYVAAIVMCVGLTMFTLADSSTSPNFDLIGV 618
Q +FKS K++PVMI I +R +Y F +Y++A+++ +GL +FTLAD+ +SPNF +IGV
Sbjct: 113 QIMFKSTKVLPVMIMGAFIPGLRRKYPFHEYISAVMLVIGLILFTLADAQSSPNFSMIGV 172
Query: 617 LVISLALLCDAIIGNVQEKAMKQY-QASNNEVVFYSYAIACVYLVCITGFSGILVDGFAY 441
++S AL+ DA +GN+QE K + E++F S + +LV +G L+ +
Sbjct: 173 AMVSGALVMDAFLGNLQEAIFKMNPDTTQMEMLFCSTVVGLPFLVVPMVLTGELMRAWTA 232
Query: 440 CAETPVEMYRNIFLLSLSGYMGLQAVLTLVRICGATVAVTVTTMRKALSI 291
C++ + +Y + +++ ++G +VL+L+ + GA V T+ L +
Sbjct: 233 CSQ-HMYVYAVLVFEAMATFVGQVSVLSLIALFGAATTAMVRTLVLLLKV 281
>06_03_0629 +
22920206-22920291,22920430-22920527,22920657-22920796,
22921596-22921626,22922025-22922128,22922439-22922560,
22922651-22923050,22923245-22923268
Length = 334
Score = 64.5 bits (150), Expect = 9e-11
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Frame = -1
Query: 791 QXIFKSCKLIPVMIGSIIIMRXRYSFXDYVAAIVMCVGLTMFTLADSST-------SPNF 633
Q + KS K+IPVM+ I+ +Y+F +Y+ ++ G++ F L +S+ +PN
Sbjct: 108 QVLAKSSKMIPVMLMGTILYGVKYTFPEYICTFLVAGGVSSFALLKTSSKTIKKLANPNA 167
Query: 632 DLIGVLVISLALLCDAIIGNVQEKAMKQYQASNN-EVVFYSYAIACVYLVCITGFSGIL- 459
L G + L L D + Q+ +Y +N +++ +Y I + +L
Sbjct: 168 PL-GYTLCFLNLAFDGYTNSTQDLIKSRYPKTNPWDIMLGMNLWGTIYNAVIMFVAPLLF 226
Query: 458 -----VDGF---AYCAETPVEMYRNIFLLSLSGYMGLQAVLTLVRICGATVAVTVTTMRK 303
+GF +C E P E+ +I L L G +G + + G+ T+TT RK
Sbjct: 227 SNWPYANGFEAVRFCQENP-EVAWDILLFCLCGAVGQNFIFLTISRFGSLTNTTITTTRK 285
Query: 302 ALSIIISFLLFSKPFVFQYVWSGSLVVL 219
+SI+IS ++ P + W GS+V++
Sbjct: 286 FMSIVISSVISGNPLSLKQ-W-GSVVMV 311
>05_01_0119 +
820566-820739,822708-822737,823153-823266,823341-823433,
823521-823586,824076-824174,824480-824559,825039-825151,
825600-825688,825955-826041,826128-826130,826285-826383
Length = 348
Score = 60.9 bits (141), Expect = 1e-09
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 7/186 (3%)
Frame = -1
Query: 791 QXIFKSCKLIPVMIGSIIIMRXRYSFXDYVAAIVMCVGLTMFTL--ADSSTSP-----NF 633
Q + K K+IPVMI IIMR +Y DY A+V+ VG ++F L A SP
Sbjct: 147 QTLAKCAKMIPVMIWGTIIMRKKYGGKDYFFAVVVTVGCSLFILYPASMDASPFNRGREN 206
Query: 632 DLIGVLVISLALLCDAIIGNVQEKAMKQYQASNNEVVFYSYAIACVYLVCITGFSGILVD 453
+ GV ++ L D Q+K K Y + +FY+ +CV + ++
Sbjct: 207 TIWGVSLMLGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTMCSCVLSLSGLILQNQMIP 266
Query: 452 GFAYCAETPVEMYRNIFLLSLSGYMGLQAVLTLVRICGATVAVTVTTMRKALSIIISFLL 273
+ P + + ++ +LS + +R GA T+ T R+ L+I+ L
Sbjct: 267 AVDFMFRHP-DCFYDVIILSSVATASQFFISYTIRTFGALTFATIMTTRQ-LAIVFG-AL 323
Query: 272 FSKPFV 255
++K F+
Sbjct: 324 YTKSFL 329
>01_06_0711 +
31388369-31388799,31388907-31389079,31389852-31389937,
31390041-31390090,31390598-31390665,31391490-31391674,
31391884-31391970,31392075-31392169,31392509-31392635
Length = 433
Score = 32.7 bits (71), Expect = 0.35
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = -1
Query: 434 ETPVEMYRNIFLLSLSGYMGLQAVLTLVRICGATVAVTVTT---MRKALSIIISFLLFSK 264
+ + R+ L+ L G + VLT + T AVTVT +++A++I+++ L F+
Sbjct: 309 DNSTHIIRSSLLMLLGGALAFFMVLTEYVLVSVTSAVTVTVAGIVKEAVTILVAVLFFND 368
Query: 263 PFVFQYVWSGSLVVLAIYINHYSKKH 186
F + +++ + + + K H
Sbjct: 369 TFTWLKGLGLGIIIFGVSLFNLYKYH 394
>02_04_0605 -
24290777-24290830,24290914-24291075,24291494-24291694,
24291777-24291961,24292117-24292246
Length = 243
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = -1
Query: 785 IFKSCKLIPVM-IGSIIIMRXRYSFXDYVAAIVMCVGLTMFTLADSSTSPNFDLIGVLVI 609
I K C +IPV+ I I+ + RYS ++ +++ VG+ + T+ D S + L V+ +
Sbjct: 106 IAKLC-IIPVLCILEILFDKVRYSRNTKLSIVLVLVGVAVCTVTDVSVNSKGLLAAVIAV 164
Query: 608 SLALLCDAIIGNVQEK 561
L + ++Q+K
Sbjct: 165 WSTALQQHYVHHLQKK 180
>01_06_0848 +
32426550-32426613,32427013-32427167,32428470-32428526,
32428877-32428930,32429349-32429418,32429951-32432034
Length = 827
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 243 NVLEDERLAEQQERYDYGQSFPHRGDGNGYRRT-AYPHQ-RQHRLQTHIAA 389
++LE E L E + + +S +GD RT +YP Q QHR I A
Sbjct: 153 DILEGEELQESKRWWSQSRSLGQQGDAKPLSRTSSYPQQPLQHRASEPIIA 203
>05_05_0024 +
21613199-21613208,21613466-21613560,21613656-21613713,
21613843-21614037,21614237-21614316,21614402-21614512
Length = 182
Score = 29.1 bits (62), Expect = 4.3
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Frame = -1
Query: 758 VMIGSIIIMRXRYSFXDYVAAIVMCVGLTMFTLADSSTSPNFD-----LIGVLVISLALL 594
VMI + + RYS +V A GL + L+DS+ S D L+G +I +A
Sbjct: 78 VMILTRFALGTRYSLWQFVGAGTCMTGLALVLLSDSNYSDVQDESKRPLLGDALIIVATF 137
Query: 593 CDAIIGNVQEKAMKQYQASNNEVVFYSYAIACVYLVCITG 474
C A NV E +Y N + + + A+ ++ + +TG
Sbjct: 138 CFA-FSNVGE----EYCVKNKDRIEF-VAMLGIFGMLVTG 171
>10_08_0971 - 21949721-21949936,21950051-21950484,21950599-21950791,
21950909-21951007,21951114-21951191,21951275-21951669,
21954317-21954482,21954840-21954927,21955015-21955127,
21955242-21955426,21955840-21955987,21956071-21956349,
21956425-21956529,21956892-21957137,21957367-21957408,
21957539-21957613
Length = 953
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = -1
Query: 338 ATVAVTVTTMRKALSIIISFLLFSKPFVFQYVWSGSLVVLAIYINHY 198
+T A V TMR++ I +F+ + FV +V + + +++ HY
Sbjct: 907 STFAAEVYTMRRSGQIARAFVYAAATFVLSFVLGTLIYSVPVWVEHY 953
>10_08_0353 - 17101261-17102244
Length = 327
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -3
Query: 411 EHISSKPERLYGSASGVDAGEDMRCDGSRYRHHDEESSVHNH 286
E++SS P R +A+G DA DM G+RY HD NH
Sbjct: 119 EYVSSLPPRT-AAAAGHDA--DMSATGARYLAHDTVLFPVNH 157
>03_02_0611 +
9842550-9843035,9844313-9844416,9844586-9844814,
9846121-9846270
Length = 322
Score = 28.7 bits (61), Expect = 5.6
Identities = 39/184 (21%), Positives = 76/184 (41%), Gaps = 5/184 (2%)
Frame = -1
Query: 725 RYSFXDYVAAIVMCVGLTMFTLADSSTSPNFDLIGVLVISLALLCDAIIGNVQEKAMKQY 546
R S+ Y+ + + G+ + S P+F L G ++ A A+ +Q +
Sbjct: 141 RESWVTYLTLVPVVTGV----MIASGGEPSFHLFGFIMCIGATAARALKTVLQGILLSSE 196
Query: 545 QASNNEV--VFYSYAIACVYLVCITGFSGILVDGFAYCAETPVEMYRNIFLLSLSGYMGL 372
N + + Y IA + L+ T F V G E + ++LL + +
Sbjct: 197 GEKLNSMNLLLYMAPIAVILLLPATIFMEDNVVGITI--ELAKKDTTIVWLLLFNSCLAY 254
Query: 371 QAVLTLVRICGATVAVTVTTM---RKALSIIISFLLFSKPFVFQYVWSGSLVVLAIYINH 201
LT + T A+T+ + + A+++++S L+F P + +L V+ + +
Sbjct: 255 FVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYTLTVIGVILYS 314
Query: 200 YSKK 189
SKK
Sbjct: 315 ESKK 318
>11_04_0142 + 14027726-14029081
Length = 451
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 225 HQRSRPNVLEDERLAEQQERYDYGQSFPHRGDGNGYRRTAYP 350
H+ RPNV +D+++ E + YD S D +RR P
Sbjct: 15 HRCRRPNVDDDDQIEEGEICYDCHVSGSETDDDEHHRRAVLP 56
>04_03_0658 +
18447986-18448117,18448204-18448317,18448388-18448507,
18448589-18449215,18449289-18449462,18449545-18449809,
18449889-18449959,18450043-18450145,18450221-18450280,
18450533-18450744,18450830-18450901,18451446-18451502,
18451598-18451882,18452359-18452371,18452396-18452463,
18452649-18452747,18452836-18452967,18453038-18453141,
18453234-18453423,18453519-18453524
Length = 967
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 532 LFEAWYCFIAFSCTFPIIASHSNAKDITRTPIKSKFGDVLES 657
+F+ + F+ ++ HSN D+ + P K+ FG V +S
Sbjct: 768 IFKKLLILMEFTANSHLLVLHSNKNDLMKHPSKTNFGMVQKS 809
>02_05_0466 + 29278009-29278575
Length = 188
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 312 RGDGNGYRRTAYPHQRQHRLQTH 380
+GDG G+++ HQ QH Q H
Sbjct: 125 KGDGKGHQQQHQQHQHQHHPQQH 147
>12_02_0178 -
14941342-14941391,14941909-14942002,14942498-14942716,
14943409-14943492,14943783-14944067,14944349-14944501,
14944618-14944740,14945429-14945495,14946122-14946309,
14947134-14947250,14947720-14947812,14948377-14948459,
14948565-14948610
Length = 533
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = -1
Query: 242 WSGSLVVLAIYINHYSKKHPHYVPASLSSCWQQIRNYYDXEYRELKMK 99
W +VV + I +Y + + W+ ++ ++D E ++LK+K
Sbjct: 40 WYSEVVVNSEMIEYYDISGCYILRPWAMEIWELLKEFFDAEIKKLKLK 87
>02_03_0415 +
18805541-18805610,18805962-18806128,18806616-18806645,
18807459-18807515,18808268-18808337,18808915-18810998
Length = 825
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 243 NVLEDERLAEQQERYDYGQSFPHRGDGNGYRRT-AYPHQ-RQHR 368
++LEDE E + + + +GD RT +YP Q QHR
Sbjct: 151 DILEDEEFQESKRWWSQSHTLVQQGDAKPLSRTSSYPQQPLQHR 194
>01_07_0288 +
42534552-42534558,42535302-42537280,42537367-42537513,
42537982-42538526,42538906-42538981,42539357-42539437
Length = 944
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 338 HRISSPASTPLADPYSRSGLEEICSGTFQLVSQHNKQIRQL 460
HR+SSP T L++ +R +E+ S + + +N+ R L
Sbjct: 801 HRVSSPHDTELSNRRARISSDELFSASGKSDDSNNRDARSL 841
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,017,754
Number of Sequences: 37544
Number of extensions: 378564
Number of successful extensions: 978
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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