Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_J13
(876 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 26 0.52
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 24 1.6
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 3.7
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 3.7
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 3.7
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 3.7
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 3.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 3.7
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 4.9
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 4.9
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 4.9
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 4.9
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 4.9
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 4.9
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 4.9
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 4.9
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 22 6.5
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 22 6.5
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 22 8.5
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 25.8 bits (54), Expect = 0.52
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 364 KPTSLNSP*SCGAQNFPSNASIQQIPTI 447
+P S++ P AQN P N + Q IP I
Sbjct: 758 QPLSVSIPPPPSAQNVPQNTNSQAIPRI 785
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 24.2 bits (50), Expect = 1.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 843 SIVLETCRFTAQCSQLRTHFSNTNLKNKTS 754
++VLETC+ + S + +NTN N +
Sbjct: 213 AVVLETCQRNSNNSTITAGNANTNASNNNN 242
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.7
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +3
Query: 12 PLKFMSLQQIQ*HNNNIYTLYXRKYYNNHRLTRTTSKYSANVVN 143
P SL HNNN Y YNN+ + K N++N
Sbjct: 78 PKIISSLSNNTIHNNNYKYNYNNNNYNNNNYNK---KLYYNIIN 118
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.7
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +3
Query: 12 PLKFMSLQQIQ*HNNNIYTLYXRKYYNNHRLTRTTSKYSANVVN 143
P SL HNNN Y YNN+ + K N++N
Sbjct: 78 PKIISSLSNNTIHNNNYKYNYNNNNYNNNNYNK---KLYYNIIN 118
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 48 HNNNIYTLYXRKYYN 92
+NNN Y Y + YYN
Sbjct: 96 YNNNNYNNYKKLYYN 110
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 48 HNNNIYTLYXRKYYN 92
+NNN Y Y + YYN
Sbjct: 106 YNNNNYNNYKKLYYN 120
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = -1
Query: 522 NTYYVIYFNVKINVH*CLYQKVIFYNCWNLLN*RIRR 412
NT ++IY ++ C+ ++YN + L R R+
Sbjct: 340 NTDFIIYSSLSSFYIPCIIMVFLYYNIFKALRNRARK 376
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 48 HNNNIYTLYXRKYYN 92
+NNN Y Y + YYN
Sbjct: 341 YNNNNYNNYKKLYYN 355
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 48 HNNNIYTLYXRKYYN 92
+NNN Y Y + YYN
Sbjct: 98 NNNNNYNNYKKLYYN 112
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 48 HNNNIYTLYXRKYYN 92
+NNN Y Y + YYN
Sbjct: 98 NNNNNYNNYKKLYYN 112
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 48 HNNNIYTLYXRKYYN 92
+NNN Y Y + YYN
Sbjct: 98 NNNNNYNNYKKLYYN 112
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 48 HNNNIYTLYXRKYYN 92
+NNN Y Y + YYN
Sbjct: 98 NNNNNYNNYKKLYYN 112
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 48 HNNNIYTLYXRKYYN 92
+NNN Y Y + YYN
Sbjct: 98 NNNNNYNNYKKLYYN 112
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 48 HNNNIYTLYXRKYYN 92
+NNN Y Y + YYN
Sbjct: 98 NNNNNYNNYKKLYYN 112
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 48 HNNNIYTLYXRKYYN 92
+NNN Y Y + YYN
Sbjct: 98 NNNNNYNNYKKLYYN 112
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 48 HNNNIYTLYXRKYYN 92
+NNN Y Y + YYN
Sbjct: 98 NNNNNYNNYKKLYYN 112
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 129 ANVVN*ITGVIKFIFETVR 185
A VV + G++ + F+TVR
Sbjct: 219 AQVVTTVAGIVSYPFDTVR 237
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 129 ANVVN*ITGVIKFIFETVR 185
A VV + G++ + F+TVR
Sbjct: 219 AQVVTTVAGIVSYPFDTVR 237
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 21.8 bits (44), Expect = 8.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 399 CPKLSFECVNSTNSNNCRKLPSDTNI 476
C K S+ CVN + N+ L S +N+
Sbjct: 19 CEKCSYSCVNKSMLNS--HLKSHSNV 42
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 267,301
Number of Sequences: 438
Number of extensions: 6534
Number of successful extensions: 25
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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