Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_J10
         (547 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0270 - 7011363-7012302,7013237-7013640,7014264-7014333,701...    29   3.2  
09_02_0147 - 4968360-4969151,4969959-4970369,4970856-4970921,497...    28   4.2  
11_01_0036 + 268028-268168,268734-268839,268920-269031,269126-26...    28   5.6  
09_03_0025 - 11665969-11666417,11666490-11666594,11666667-116668...    28   5.6  
08_02_0575 - 18876988-18877029,18877072-18877102,18878290-188784...    27   9.8  
06_03_0342 + 19737951-19738772                                         27   9.8  

>03_02_0270 -
           7011363-7012302,7013237-7013640,7014264-7014333,
           7014835-7015331,7015959-7016283,7018060-7018292
          Length = 822

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
 Frame = -3

Query: 539 KESXELIKALLSRPVLSE-QEIK------WLIDDVVPDA----VVNAIWILLLSKYQHSX 393
           K   EL+  L S P LS+ Q++K      W   +V+P      ++  +   L  ++ HS 
Sbjct: 120 KIQTELVACLPSLPHLSDLQKLKDELKSSWNSIEVLPSLSRWHLLELLSSCLPHRFTHSN 179

Query: 392 EEILNILQQHKEEVAKQEIDDELVAELLRNDLFVSLVG 279
           E  L++LQ  KE++A   I  +L+  + R   +  L G
Sbjct: 180 ETSLSVLQSMKEDIANM-IAPQLIRPIPRWPFYAFLGG 216


>09_02_0147 -
           4968360-4969151,4969959-4970369,4970856-4970921,
           4972164-4972233,4972311-4972369
          Length = 465

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
 Frame = -3

Query: 302 DLFVSLVGTPLYPKMLSYIISREGGSEDAPYSVP--WATRELLKANYLAEAGHLRLMXDG 129
           D  V  + TP      SY  +R G ++ A  SVP  W T ++ + +       L  +   
Sbjct: 190 DAIVEKILTPPSKVTWSYTYTRPGYAKKAHQSVPKDWWTEDVSELDIDVFRSLLSTVCAA 249

Query: 128 --VPPPLRGFSQSVLYCKNI 75
             +PPPL G +  V  CK++
Sbjct: 250 RLLPPPLIGEALHVYACKHL 269


>11_01_0036 +
           268028-268168,268734-268839,268920-269031,269126-269241,
           269321-269399,269476-269614,269689-269747,269924-270218,
           270303-270362,270502-270933
          Length = 512

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 16/66 (24%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = -3

Query: 524 LIKALLSRPVLSEQEIKWLIDDV-VPDAVVNAIWILLLSKYQHSXEEILNILQQHKEEVA 348
           + K  LS   L+E    +++    VPD ++   +++  ++ +   +++ NIL+Q +E   
Sbjct: 309 IFKFKLSEQNLTEGTPNYVVKRTFVPDYMLEKQYLINKAEEELMDDDVDNILKQDRETDQ 368

Query: 347 KQEIDD 330
           +QE++D
Sbjct: 369 QQELED 374


>09_03_0025 -
           11665969-11666417,11666490-11666594,11666667-11666856,
           11666933-11667120,11667240-11667571,11667654-11667940,
           11668027-11668911
          Length = 811

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 16/68 (23%), Positives = 31/68 (45%)
 Frame = +3

Query: 102 REPSQGRRDAIXHETEVPGLGQVVGLQQLSRGPRHGVRRVLGAALPADDVAEHFGVQRSA 281
           +EP  G +     + E+P   +V      S+GP  G   + G++ P+DD  E     ++ 
Sbjct: 461 QEPPTGNQSDAGPDPEIP---EVEAQTTTSQGPEVGNDSIAGSSGPSDDDGEEIPRIKAT 517

Query: 282 DQTHEQVV 305
           D +   ++
Sbjct: 518 DDSRPPIL 525


>08_02_0575 -
           18876988-18877029,18877072-18877102,18878290-18878418,
           18878512-18879154,18882042-18883990,18884964-18885040
          Length = 956

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = -3

Query: 419 LLSKYQHSXEEILNILQQHKEEVAKQEID 333
           +  ++QH  +E+ N+L+  +EE+ K+E D
Sbjct: 904 ITEEFQHK-DEVCNVLEHGREELRKKETD 931


>06_03_0342 + 19737951-19738772
          Length = 273

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 192 RGPRHGVRRVLGAALPADDVA 254
           RGP   V R LGAA+PAD  A
Sbjct: 215 RGPLADVARQLGAAVPADAAA 235


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,598,959
Number of Sequences: 37544
Number of extensions: 239617
Number of successful extensions: 912
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)