Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_J10
         (547 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    26   0.22 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    26   0.22 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   6.2  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   8.2  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   8.2  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   8.2  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   8.2  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   8.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   8.2  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            21   8.2  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 399 MLIFTEQENPDGVHDCVRDDVVDQPFNFLLAKDGPAEQ 512
           +++FT  E+  G+ +  R   + QPF + LA DG   Q
Sbjct: 200 VVLFTRAEDARGILEAARRSNLSQPFQW-LASDGWGRQ 236



 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 42  CEQCKHYYYV 13
           C+QC+ Y YV
Sbjct: 470 CDQCEEYEYV 479


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 399 MLIFTEQENPDGVHDCVRDDVVDQPFNFLLAKDGPAEQ 512
           +++FT  E+  G+ +  R   + QPF + LA DG   Q
Sbjct: 290 VVLFTRAEDARGILEAARRSNLSQPFQW-LASDGWGRQ 326



 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 42  CEQCKHYYYV 13
           C+QC+ Y YV
Sbjct: 560 CDQCEEYEYV 569


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 227 SEDAPYSVPWATRELLK 177
           S+ +P S+P+ATR  +K
Sbjct: 124 SQASPTSIPYATRAEIK 140


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 170 YLAEAGHLRLMXDGVPPPLR 111
           Y A  G +     G+PPP R
Sbjct: 476 YRAVCGRIENTIQGLPPPYR 495


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 391 KRY*TYCNSTRKKLRNKKSTMSWSRS 314
           ++Y   CN   K L  + S   +SRS
Sbjct: 17  RQYEKLCNEEEKLLEERTSRKRYSRS 42


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 391 KRY*TYCNSTRKKLRNKKSTMSWSRS 314
           ++Y   CN   K L  + S   +SRS
Sbjct: 17  RQYEKLCNEEEKLLEERTSRKRYSRS 42


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 391 KRY*TYCNSTRKKLRNKKSTMSWSRS 314
           ++Y   CN   K L  + S   +SRS
Sbjct: 17  RQYEKLCNEEEKLLEERTSRKRYSRS 42


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 391 KRY*TYCNSTRKKLRNKKSTMSWSRS 314
           ++Y   CN   K L  + S   +SRS
Sbjct: 17  RQYEKLCNEEEKLLEERTSRKRYSRS 42


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 290 SRTSRCGATPRPAHRRFLVSQLL 358
           S  +R G+T RP+ R    SQ++
Sbjct: 393 SGINRVGSTRRPSRRNSCESQMM 415


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 361 RKKLRNKKSTMSWSRSCS 308
           RKK  N+   M W+  CS
Sbjct: 11  RKKNLNQNQMMIWALDCS 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,051
Number of Sequences: 438
Number of extensions: 2435
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)