Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_J07
(517 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49254-1|CAA89220.1| 153|Homo sapiens L23-related gene protein. 107 2e-23
U26596-1|AAC50415.1| 153|Homo sapiens ribosomal protein L23-rel... 107 2e-23
BC027710-1|AAH27710.1| 153|Homo sapiens mitochondrial ribosomal... 107 2e-23
D29677-1|BAA06147.2| 1943|Homo sapiens KIAA0054 protein. 32 1.4
BC130582-1|AAI30583.1| 1942|Homo sapiens helicase with zinc fing... 32 1.4
BC094881-1|AAH94881.1| 1163|Homo sapiens HELZ protein protein. 32 1.4
S95936-1|AAB22049.1| 698|Homo sapiens transferrin protein. 29 7.3
M12530-1|AAA61140.1| 698|Homo sapiens TF protein. 29 7.3
M12525-1|AAA61142.1| 277|Homo sapiens TF protein. 29 7.3
DQ923758-1|ABI97197.1| 698|Homo sapiens transferrin protein. 29 7.3
DQ525716-1|ABF47110.1| 698|Homo sapiens transferrin protein. 29 7.3
BC059367-1|AAH59367.1| 698|Homo sapiens transferrin protein. 29 7.3
AY308797-1|AAP45055.1| 698|Homo sapiens transferrin protein. 29 7.3
AK222755-1|BAD96475.1| 698|Homo sapiens transferrin variant pro... 29 7.3
AF288144-1|AAK77664.1| 698|Homo sapiens transferin protein. 29 7.3
>Z49254-1|CAA89220.1| 153|Homo sapiens L23-related gene protein.
Length = 153
Score = 107 bits (257), Expect = 2e-23
Identities = 57/120 (47%), Positives = 73/120 (60%), Gaps = 1/120 (0%)
Frame = -3
Query: 416 YPIYQRGNPQLRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIXNYLEKIYEVPVV 237
YP+Y+ G PQLRVF NF+++LVRP Q + V F MEMT+ D+ NYLE IY VPV
Sbjct: 7 YPLYRLGGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVA 66
Query: 236 DVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLF-EKSINEEEXHAKSL 60
VRT++ G K+ + IK+ D KVA+V L TF +PDLF EK + E A L
Sbjct: 67 AVRTRVQHGSNKRRDHRNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDESPEGSAADDL 126
>U26596-1|AAC50415.1| 153|Homo sapiens ribosomal protein
L23-related product protein.
Length = 153
Score = 107 bits (257), Expect = 2e-23
Identities = 57/120 (47%), Positives = 73/120 (60%), Gaps = 1/120 (0%)
Frame = -3
Query: 416 YPIYQRGNPQLRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIXNYLEKIYEVPVV 237
YP+Y+ G PQLRVF NF+++LVRP Q + V F MEMT+ D+ NYLE IY VPV
Sbjct: 7 YPLYRLGGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVA 66
Query: 236 DVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLF-EKSINEEEXHAKSL 60
VRT++ G K+ + IK+ D KVA+V L TF +PDLF EK + E A L
Sbjct: 67 AVRTRVQHGSNKRRDHRNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDESPEGSAADDL 126
>BC027710-1|AAH27710.1| 153|Homo sapiens mitochondrial ribosomal
protein L23 protein.
Length = 153
Score = 107 bits (257), Expect = 2e-23
Identities = 57/120 (47%), Positives = 73/120 (60%), Gaps = 1/120 (0%)
Frame = -3
Query: 416 YPIYQRGNPQLRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIXNYLEKIYEVPVV 237
YP+Y+ G PQLRVF NF+++LVRP Q + V F MEMT+ D+ NYLE IY VPV
Sbjct: 7 YPLYRLGGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVA 66
Query: 236 DVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLF-EKSINEEEXHAKSL 60
VRT++ G K+ + IK+ D KVA+V L TF +PDLF EK + E A L
Sbjct: 67 AVRTRVQHGSNKRRDHRNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDESPEGSAADDL 126
>D29677-1|BAA06147.2| 1943|Homo sapiens KIAA0054 protein.
Length = 1943
Score = 31.9 bits (69), Expect = 1.4
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = -3
Query: 416 YPIYQRGNPQ---LRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEM-TKYDIXNY 267
+P + GNPQ LRV+ N W+K V P Q I H + +M K DI +
Sbjct: 713 HPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKH 766
>BC130582-1|AAI30583.1| 1942|Homo sapiens helicase with zinc finger
protein.
Length = 1942
Score = 31.9 bits (69), Expect = 1.4
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = -3
Query: 416 YPIYQRGNPQ---LRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEM-TKYDIXNY 267
+P + GNPQ LRV+ N W+K V P Q I H + +M K DI +
Sbjct: 712 HPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKH 765
>BC094881-1|AAH94881.1| 1163|Homo sapiens HELZ protein protein.
Length = 1163
Score = 31.9 bits (69), Expect = 1.4
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = -3
Query: 416 YPIYQRGNPQ---LRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEM-TKYDIXNY 267
+P + GNPQ LRV+ N W+K V P Q I H + +M K DI +
Sbjct: 713 HPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKH 766
>S95936-1|AAB22049.1| 698|Homo sapiens transferrin protein.
Length = 698
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 179 VIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEXHAKSLDESKKNFRKY 30
V K D V T+P+ K PD + K++NE++ LD ++K +Y
Sbjct: 544 VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEY 593
>M12530-1|AAA61140.1| 698|Homo sapiens TF protein.
Length = 698
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 179 VIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEXHAKSLDESKKNFRKY 30
V K D V T+P+ K PD + K++NE++ LD ++K +Y
Sbjct: 544 VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEY 593
>M12525-1|AAA61142.1| 277|Homo sapiens TF protein.
Length = 277
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 179 VIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEXHAKSLDESKKNFRKY 30
V K D V T+P+ K PD + K++NE++ LD ++K +Y
Sbjct: 123 VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEY 172
>DQ923758-1|ABI97197.1| 698|Homo sapiens transferrin protein.
Length = 698
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 179 VIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEXHAKSLDESKKNFRKY 30
V K D V T+P+ K PD + K++NE++ LD ++K +Y
Sbjct: 544 VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEY 593
>DQ525716-1|ABF47110.1| 698|Homo sapiens transferrin protein.
Length = 698
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 179 VIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEXHAKSLDESKKNFRKY 30
V K D V T+P+ K PD + K++NE++ LD ++K +Y
Sbjct: 544 VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEY 593
>BC059367-1|AAH59367.1| 698|Homo sapiens transferrin protein.
Length = 698
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 179 VIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEXHAKSLDESKKNFRKY 30
V K D V T+P+ K PD + K++NE++ LD ++K +Y
Sbjct: 544 VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEY 593
>AY308797-1|AAP45055.1| 698|Homo sapiens transferrin protein.
Length = 698
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 179 VIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEXHAKSLDESKKNFRKY 30
V K D V T+P+ K PD + K++NE++ LD ++K +Y
Sbjct: 544 VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEY 593
>AK222755-1|BAD96475.1| 698|Homo sapiens transferrin variant
protein.
Length = 698
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 179 VIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEXHAKSLDESKKNFRKY 30
V K D V T+P+ K PD + K++NE++ LD ++K +Y
Sbjct: 544 VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEY 593
>AF288144-1|AAK77664.1| 698|Homo sapiens transferin protein.
Length = 698
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 179 VIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEXHAKSLDESKKNFRKY 30
V K D V T+P+ K PD + K++NE++ LD ++K +Y
Sbjct: 544 VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEY 593
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,258,811
Number of Sequences: 237096
Number of extensions: 1138298
Number of successful extensions: 1705
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1705
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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