BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_J02
(706 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC112223-1|AAI12224.1| 831|Homo sapiens solute carrier family 3... 31 5.3
BC101516-1|AAI01517.1| 831|Homo sapiens solute carrier family 3... 31 5.3
BC073909-1|AAH73909.1| 361|Homo sapiens SLC39A10 protein protein. 31 5.3
AB033091-1|BAA86579.1| 835|Homo sapiens KIAA1265 protein protein. 31 5.3
>BC112223-1|AAI12224.1| 831|Homo sapiens solute carrier family 39
(zinc transporter), member 10 protein.
Length = 831
Score = 30.7 bits (66), Expect = 5.3
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Frame = +3
Query: 411 HLCSKHASI-EVTNVSFCHPVH-HDLTLTCHNHHISSKTSYYACHQISDP*NDLHHDHET 584
+LC + I + ++ H +H HDL HNHH +KT H HH H
Sbjct: 596 YLCIEEEKIIDHSHSDGLHTIHEHDLHAAAHNHHGENKT-VLRKHNHQWHHKHSHHSHGP 654
Query: 585 LNDASYLNNPSSYHKEILTSAPSLIYDYCDTLRIKVEF 698
+ S L + + I+++ D L I F
Sbjct: 655 CHSGSDLKETGIANIAWMVIMGDGIHNFSDGLAIGAAF 692
>BC101516-1|AAI01517.1| 831|Homo sapiens solute carrier family 39
(zinc transporter), member 10 protein.
Length = 831
Score = 30.7 bits (66), Expect = 5.3
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Frame = +3
Query: 411 HLCSKHASI-EVTNVSFCHPVH-HDLTLTCHNHHISSKTSYYACHQISDP*NDLHHDHET 584
+LC + I + ++ H +H HDL HNHH +KT H HH H
Sbjct: 596 YLCIEEEKIIDHSHSDGLHTIHEHDLHAAAHNHHGENKT-VLRKHNHQWHHKHSHHSHGP 654
Query: 585 LNDASYLNNPSSYHKEILTSAPSLIYDYCDTLRIKVEF 698
+ S L + + I+++ D L I F
Sbjct: 655 CHSGSDLKETGIANIAWMVIMGDGIHNFSDGLAIGAAF 692
>BC073909-1|AAH73909.1| 361|Homo sapiens SLC39A10 protein protein.
Length = 361
Score = 30.7 bits (66), Expect = 5.3
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Frame = +3
Query: 411 HLCSKHASI-EVTNVSFCHPVH-HDLTLTCHNHHISSKTSYYACHQISDP*NDLHHDHET 584
+LC + I + ++ H +H HDL HNHH +KT H HH H
Sbjct: 126 YLCIEEEKIIDHSHSDGLHTIHEHDLHAAAHNHHGENKT-VLRKHNHQWHHKHSHHSHGP 184
Query: 585 LNDASYLNNPSSYHKEILTSAPSLIYDYCDTLRIKVEF 698
+ S L + + I+++ D L I F
Sbjct: 185 CHSGSDLKETGIANIAWMVIMGDGIHNFSDGLAIGAAF 222
>AB033091-1|BAA86579.1| 835|Homo sapiens KIAA1265 protein protein.
Length = 835
Score = 30.7 bits (66), Expect = 5.3
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Frame = +3
Query: 411 HLCSKHASI-EVTNVSFCHPVH-HDLTLTCHNHHISSKTSYYACHQISDP*NDLHHDHET 584
+LC + I + ++ H +H HDL HNHH +KT H HH H
Sbjct: 600 YLCIEEEKIIDHSHSDGLHTIHEHDLHAAAHNHHGENKT-VLRKHNHQWHHKHSHHSHGP 658
Query: 585 LNDASYLNNPSSYHKEILTSAPSLIYDYCDTLRIKVEF 698
+ S L + + I+++ D L I F
Sbjct: 659 CHSGSDLKETGIANIAWMVIMGDGIHNFSDGLAIGAAF 696
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,773,243
Number of Sequences: 237096
Number of extensions: 1416534
Number of successful extensions: 2486
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2485
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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