Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_I22
(591 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0313 - 19475203-19475244,19475883-19475976,19476933-194771... 128 2e-30
01_01_0826 + 6431621-6431917,6432356-6432505,6432614-6432796,643... 108 4e-24
05_06_0103 + 25597531-25597608,25597692-25597892,25598599-255987... 87 1e-17
01_01_0824 + 6411899-6411931,6412001-6412210,6412302-6412451,641... 80 1e-15
04_04_1546 - 34301905-34302093,34302549-34302911,34303031-343034... 51 8e-07
02_01_0558 + 4109929-4110042,4110989-4111097,4111404-4111563,411... 30 1.6
01_04_0136 + 16506747-16506982,16507128-16507728,16510443-165108... 30 1.6
03_02_0695 + 10472174-10472286,10472390-10473239 29 2.1
04_04_1586 - 34621945-34623366 29 3.7
02_05_0230 + 27029725-27030871,27030995-27031113,27031225-270313... 28 6.4
04_04_0053 + 22389227-22389613,22390528-22390981,22391618-223916... 27 8.5
>06_03_0313 -
19475203-19475244,19475883-19475976,19476933-19477129,
19477254-19477394,19477873-19478073,19478775-19478894,
19479677-19479859,19479946-19480095,19481305-19481508,
19481545-19481547
Length = 444
Score = 128 bits (310), Expect = 2e-30
Identities = 72/174 (41%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Frame = -2
Query: 521 LVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEALAEKQ 342
LV +A G EEME + +D+LRR V +A LE + ++ SR+V +V D L +AL KQ
Sbjct: 222 LVPIANGTEEMEATMIIDILRRAKANVVVASLEETLEIVASRKVKMVADVLLDDAL--KQ 279
Query: 341 QYDAVILPGGLEGSDSLSKSEK-VGALLKDHEDNGKXXXXXXXXXXXXXAHGVARGRRVT 165
QYD ++LPGGL G+ + +KS+K +G + K E N HG+ +G++ T
Sbjct: 280 QYDLILLPGGLGGAQAYAKSDKLIGLIKKQAEANKLYGAICASPAIALEPHGLLKGKKAT 339
Query: 164 SYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTXIELLTGKEKA 3
S+P +KLS D + + RVVVDGN++TS+GPGT+ F L +E L G+E+A
Sbjct: 340 SFPGMWNKLS--DQSECK-NRVVVDGNLITSQGPGTSMEFSLAIVEKLFGRERA 390
Score = 108 bits (260), Expect = 3e-24
Identities = 71/175 (40%), Positives = 99/175 (56%), Gaps = 2/175 (1%)
Frame = -2
Query: 521 LVILAQGAEEMETVITVDMLRRGGVTVTLAGLE-GSSPVLCSRQVTLVPDKSLTEALAEK 345
LV +A G E ME VITVD+LRR G V++A ++ GS+ V + V L D +L + LA+
Sbjct: 3 LVPIASGTEPMEAVITVDVLRRAGADVSVASVDPGSAQVGGAWGVKLAAD-ALLDDLADA 61
Query: 344 QQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXAH-GVARGRRV 168
+ +D + LPGG+ GS +L + + ++K H GK G+ G +
Sbjct: 62 E-FDLISLPGGMPGSSNLRDCKLLENMVKKHAGKGKLYAAICAAPAVALGSWGLLNGLKA 120
Query: 167 TSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTXIELLTGKEKA 3
T YPS DKL + + VE RV +DGN VTSRGPGTA + + +E L GKEKA
Sbjct: 121 TCYPSFMDKLPS-EVNAVES-RVQIDGNCVTSRGPGTAMEYSVVLVEQLYGKEKA 173
>01_01_0826 +
6431621-6431917,6432356-6432505,6432614-6432796,
6433305-6433385,6433548-6433586,6433646-6433849,
6433933-6434073,6434270-6434437,6434498-6434518
Length = 427
Score = 108 bits (259), Expect = 4e-24
Identities = 65/175 (37%), Positives = 100/175 (57%), Gaps = 2/175 (1%)
Frame = -2
Query: 521 LVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSR-QVTLVPDKSLTEALAEK 345
LV +A G+EEME + +D+LRR G VT+A +E V+ R + L+ D + EA K
Sbjct: 252 LVPVANGSEEMEALNLIDILRRAGANVTVASVEDKLQVVTRRHKFNLIADIMVEEAA--K 309
Query: 344 QQYDAVILPGGLEGSDSLSKSEKVGALLKDH-EDNGKXXXXXXXXXXXXXAHGVARGRRV 168
+++D +++PGGL G+ LS ++ + LLK E N HG+ +G++
Sbjct: 310 REFDLIVMPGGLPGAQKLSSTKVLVDLLKKQAESNKPYGAICASPAYVLEPHGLLKGKKA 369
Query: 167 TSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTXIELLTGKEKA 3
TS+P L+ D + + RVVVDGN++TS+ PG+A F L +E L G+EKA
Sbjct: 370 TSFPPMAHLLT--DQSACDS-RVVVDGNLITSKAPGSATEFALAIVEKLFGREKA 421
Score = 87.4 bits (207), Expect = 7e-18
Identities = 64/192 (33%), Positives = 93/192 (48%), Gaps = 7/192 (3%)
Frame = -2
Query: 557 RAFKSRTMS-KSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSP-----VLCSR 396
RAF + K LV +A G E +E T D+L R G VT+A + + V +
Sbjct: 16 RAFAAAAAEPKRVLVPVADGTEPVEAAATADVLNRAGARVTVATADPAGDDRGLLVEAAF 75
Query: 395 QVTLVPDKSLTEALAEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXX 216
V LV D + + E + +D + LPGG+ GS +L + + ++K + G
Sbjct: 76 GVKLVADGRVADL--EGEAFDLIALPGGMPGSANLRDCKVLEKMVKKQAEQGGLYAAICA 133
Query: 215 XXXXXXAH-GVARGRRVTSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGL 39
AH G+ +G + T YPS +K +A RVVVD N VTS+GP TA + L
Sbjct: 134 TPAVTLAHWGLLKGLKATCYPSFMEKFTAEIIPV--NSRVVVDRNAVTSQGPATAIEYAL 191
Query: 38 TXIELLTGKEKA 3
+E L GKEK+
Sbjct: 192 ALVEQLYGKEKS 203
>05_06_0103 +
25597531-25597608,25597692-25597892,25598599-25598748,
25598906-25599019,25599699-25599776,25600008-25600208,
25601312-25601399,25601432-25601742
Length = 406
Score = 87.0 bits (206), Expect = 1e-17
Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 16/189 (8%)
Frame = -2
Query: 521 LVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEALAEKQ 342
L+ +A G+EEME ++ D+LRR V V LA +E S+ ++ S+++ +V DK +++A A
Sbjct: 209 LIPIANGSEEMEIIMLTDVLRRANVNVVLASVEKSTSIVGSQRMRIVADKCISDASA--L 266
Query: 341 QYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXAHG--------- 189
+YD +ILPGG G++ L KS + LLK+ + G+
Sbjct: 267 EYDLIILPGGPAGAERLHKSSVLKKLLKEQKQTGRMYEAGFTPGDILGLKTLGILYSLAW 326
Query: 188 -------VARGRRVTSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTXI 30
V + + VT++PS ++L+ ++ +VV+DGN++T G GT F L I
Sbjct: 327 KITAIEIVDQDKTVTAHPSIVNQLTC---EVIDRSKVVIDGNLITGMGLGTVIDFSLAII 383
Query: 29 ELLTGKEKA 3
+ G +A
Sbjct: 384 KKFFGHGRA 392
Score = 62.1 bits (144), Expect = 3e-10
Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = -2
Query: 566 ADDRAFKSRTMSKSALVI-LAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQV 390
A A S T +K +++ +A G EEME VI +LRR G VTLA +E V SR
Sbjct: 12 ASTAASSSTTPAKKKVLLPIAMGTEEMEAVILAGVLRRAGADVTLASVEDGLEVEASRGS 71
Query: 389 TLVPDKSLTEALAEKQQYDAVILPGGLEGSDSLSKS 282
+V DK + A Q +D V LPGG+ GS L S
Sbjct: 72 HIVADKRI--AACADQVFDLVALPGGMPGSVRLRDS 105
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = -2
Query: 107 ERVVVDGNVVTSRGPGTAYWFGLTXIELLTGKEKA 3
+R V G + TSRGPGTA+ F L+ +E L G KA
Sbjct: 140 KRKKVSGELTTSRGPGTAFQFALSFVEQLFGPCKA 174
>01_01_0824 +
6411899-6411931,6412001-6412210,6412302-6412451,
6413787-6413969,6417705-6417779,6417959-6418102,
6418233-6418418,6418515-6418694
Length = 386
Score = 79.8 bits (188), Expect = 1e-15
Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 2/179 (1%)
Frame = -2
Query: 533 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLE-GSSPVLCSRQVTLVPDKSLTEA 357
+K LV + G E +E + +D+LRR G VT+A + G V V +V D +
Sbjct: 9 TKKVLVPIVAGTEPVEAAVPIDVLRRAGADVTVASADDGELVVEVMYGVRIVADALVAGG 68
Query: 356 LAEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXAH-GVAR 180
+D ++LPGG+ G+ +L + A+++ H G A G+
Sbjct: 69 DCAAAHFDLIVLPGGVPGAANLGGCAALEAMVRRHAATGGLYAAICAAPPLALASWGMLN 128
Query: 179 GRRVTSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTXIELLTGKEKA 3
G + T++P DK + V+ VVVD + VTSRGP T+ F L +E L K KA
Sbjct: 129 GLKATAHPLFVDKFPP-EVAAVDAS-VVVDASAVTSRGPATSTEFALALVEQLYSKNKA 185
Score = 67.7 bits (158), Expect = 6e-12
Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 2/175 (1%)
Frame = -2
Query: 521 LVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQ-VTLVPDKSLTEALAEK 345
LV +A G EEME + +D+LRR V +A E + + +R + ++ ++ T + K
Sbjct: 219 LVPVANGTEEMELITIIDVLRRADADVVVASAENAGVEIVARHGMRIITERLNTFSPRLK 278
Query: 344 QQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXA-HGVARGRRV 168
QQ GG G+ ++S +EK+ LLK K HG+ G++
Sbjct: 279 QQ-------GGTPGAKTMSSNEKLVTLLKKQAAASKPYGAIGAATAHVLEPHGLLEGKKA 331
Query: 167 TSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTXIELLTGKEKA 3
GD RVVVDGNV+TS G GTA F + +E L G++ A
Sbjct: 332 ADQ-------DGGDECE---SRVVVDGNVITSGGTGTAMEFAVAAVEKLLGRDVA 376
>04_04_1546 -
34301905-34302093,34302549-34302911,34303031-34303471,
34304331-34304447,34304540-34304593
Length = 387
Score = 50.8 bits (116), Expect = 8e-07
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Frame = -2
Query: 350 EKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXAHGVARGRR 171
+ YDA+++PGG + L+ ++KV +L+K D K A GV +GR+
Sbjct: 270 DASSYDALVIPGG-RAPEYLALNDKVISLVKGFMDKAKPVASICHGQQILSAAGVLQGRK 328
Query: 170 VTSYPSTRDKLSAGDYTYVEG---ERVVVDGNVVTSRG-PG 60
T+YP+ + + G T++E +R DGN+VT PG
Sbjct: 329 CTAYPAVKLNVVLGGATWLEPNPIDRCFTDGNLVTGAAWPG 369
>02_01_0558 +
4109929-4110042,4110989-4111097,4111404-4111563,
4111721-4111796,4111984-4112109,4112233-4112484
Length = 278
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 470 DMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPD 375
DM+ RG ++ L L G SP L RQ VPD
Sbjct: 201 DMVARGALSCGLGHLGGLSPALNPRQACRVPD 232
>01_04_0136 +
16506747-16506982,16507128-16507728,16510443-16510842,
16513595-16513709,16513776-16514352
Length = 642
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -2
Query: 533 SKSALVILAQGAEEMETVITVDMLRRGG--VTVTLAGLEGSSPVLCSRQVTLVPDKSLT 363
+K A VI++ E ET+ V +L + ++ +L L+G SP LC+ + + + SL+
Sbjct: 528 NKEAPVIISDKLSEDETIRLVTVLEKHHSIMSCSLQDLKGISPALCTHCIPIELESSLS 586
>03_02_0695 + 10472174-10472286,10472390-10473239
Length = 320
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 140 LSAGDYTYVEGERVVVDGNVVTSR 69
L++ D Y+ G +VVDG V TSR
Sbjct: 292 LASDDSRYISGHNLVVDGGVTTSR 315
>04_04_1586 - 34621945-34623366
Length = 473
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 528 VCVSDFGAGCRGDGDSYNC*YAETRRGNSYS 436
+C + G GC G GD+ C Y+ T SY+
Sbjct: 189 ICRTLSGTGCGGGGDAGKCDYSVTYGDGSYT 219
>02_05_0230 +
27029725-27030871,27030995-27031113,27031225-27031349,
27031491-27031590,27031680-27031757,27032818-27032901,
27033077-27033162,27033869-27034049,27034596-27034646
Length = 656
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -2
Query: 452 GVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEALAEKQQYDAVI 324
G T+ G GS+ LC+ +V + +AL+ +YD V+
Sbjct: 521 GQTLFCGGFAGSTAALCTTPFDVVKTRVQLQALSPISKYDGVL 563
>04_04_0053 +
22389227-22389613,22390528-22390981,22391618-22391673,
22391757-22391887,22391976-22392072,22393329-22393484
Length = 426
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 143 KLSAGDYTYVEGERVVVDGNVVTSRGPG 60
+L A Y V+G +V++D N SRG G
Sbjct: 215 ELFANKYRSVKGAKVIIDANTGRSRGYG 242
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,650,390
Number of Sequences: 37544
Number of extensions: 286082
Number of successful extensions: 982
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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