Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_I20
(903 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC073997-1|AAH73997.1| 195|Homo sapiens peroxisomal membrane pr... 43 0.002
AY044439-1|AAK95858.1| 195|Homo sapiens 22 kDa peroxisomal memb... 43 0.002
AF250136-1|AAF73963.1| 195|Homo sapiens 22kDa peroxisomal membr... 43 0.002
BC093008-1|AAH93008.1| 206|Homo sapiens hypothetical protein MG... 38 0.050
BC005064-1|AAH05064.1| 181|Homo sapiens FKSG24 protein protein. 36 0.20
AF416712-1|AAL16806.1| 181|Homo sapiens unknown protein. 36 0.20
U35399-1|AAA79061.1| 362|Homo sapiens G protein-coupled recepto... 30 10.0
U21051-1|AAA98457.1| 362|Homo sapiens G protein-coupled recepto... 30 10.0
L36148-1|AAA63180.1| 354|Homo sapiens G protein-coupled recepto... 30 10.0
BC067536-1|AAH67536.1| 362|Homo sapiens G protein-coupled recep... 30 10.0
BC067535-1|AAH67535.1| 362|Homo sapiens G protein-coupled recep... 30 10.0
>BC073997-1|AAH73997.1| 195|Homo sapiens peroxisomal membrane
protein 2, 22kDa protein.
Length = 195
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -2
Query: 563 YLPVLEANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGWAMFLAS 429
+ P L NW+ T Q IN+ ++P RVLF N+ W +LAS
Sbjct: 148 FWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYLAS 192
Score = 41.9 bits (94), Expect = 0.003
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Frame = -3
Query: 901 LYLHPIKTKAITSXVVGTAGSLASQIVAGE-----SIRLDPIXXXXXXXXXXXGTVP--H 743
L L+P+ TKA TS ++ G+ +Q++ + S LD T P H
Sbjct: 29 LRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFFFTGPLSH 88
Query: 742 YFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGK 599
+FY +E P E PLA ++LLL+RL+FAP + EGK
Sbjct: 89 FFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGK 135
>AY044439-1|AAK95858.1| 195|Homo sapiens 22 kDa peroxisomal
membrane protein 2 protein.
Length = 195
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -2
Query: 563 YLPVLEANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGWAMFLAS 429
+ P L NW+ T Q IN+ ++P RVLF N+ W +LAS
Sbjct: 148 FWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYLAS 192
Score = 41.9 bits (94), Expect = 0.003
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Frame = -3
Query: 901 LYLHPIKTKAITSXVVGTAGSLASQIVAGE-----SIRLDPIXXXXXXXXXXXGTVP--H 743
L L+P+ TKA TS ++ G+ +Q++ + S LD T P H
Sbjct: 29 LRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFFFTGPLSH 88
Query: 742 YFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGK 599
+FY +E P E PLA ++LLL+RL+FAP + EGK
Sbjct: 89 FFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGK 135
>AF250136-1|AAF73963.1| 195|Homo sapiens 22kDa peroxisomal membrane
protein-like protein.
Length = 195
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -2
Query: 563 YLPVLEANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGWAMFLAS 429
+ P L NW+ T Q IN+ ++P RVLF N+ W +LAS
Sbjct: 148 FWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYLAS 192
Score = 41.9 bits (94), Expect = 0.003
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Frame = -3
Query: 901 LYLHPIKTKAITSXVVGTAGSLASQIVAGE-----SIRLDPIXXXXXXXXXXXGTVP--H 743
L L+P+ TKA TS ++ G+ +Q++ + S LD T P H
Sbjct: 29 LRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFFFTGPLSH 88
Query: 742 YFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGK 599
+FY +E P E PLA ++LLL+RL+FAP + EGK
Sbjct: 89 FFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGK 135
>BC093008-1|AAH93008.1| 206|Homo sapiens hypothetical protein
MGC12972 protein.
Length = 206
Score = 37.9 bits (84), Expect = 0.050
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = -3
Query: 745 HYFYETVERLFPEESA-SFP-LAKKLLLERLIFAPLMQAFSLYSLARFEGKLI 593
HY+Y +++RLFP FP + KK+L+++L+ +PL+ + L EG+ +
Sbjct: 77 HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWYFLGLGCLEGQTV 129
Score = 34.3 bits (75), Expect = 0.61
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2
Query: 548 EANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGWAMFLA 432
+A+W Q +N F+PP RV ++N + GW +L+
Sbjct: 145 KADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGWDTYLS 183
>BC005064-1|AAH05064.1| 181|Homo sapiens FKSG24 protein protein.
Length = 181
Score = 35.9 bits (79), Expect = 0.20
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = -3
Query: 745 HYFYETVERLFPEES-ASFP-LAKKLLLERLIFAPLMQAFSLY 623
HY+Y +++RLFP FP + KK+L+++L+ +PL+ + Y
Sbjct: 77 HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWEFY 119
Score = 34.3 bits (75), Expect = 0.61
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2
Query: 548 EANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGWAMFLA 432
+A+W Q +N F+PP RV ++N + GW +L+
Sbjct: 120 KADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGWDTYLS 158
>AF416712-1|AAL16806.1| 181|Homo sapiens unknown protein.
Length = 181
Score = 35.9 bits (79), Expect = 0.20
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = -3
Query: 745 HYFYETVERLFPEES-ASFP-LAKKLLLERLIFAPLMQAFSLY 623
HY+Y +++RLFP FP + KK+L+++L+ +PL+ + Y
Sbjct: 77 HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWEFY 119
Score = 34.3 bits (75), Expect = 0.61
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2
Query: 548 EANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGWAMFLA 432
+A+W Q +N F+PP RV ++N + GW +L+
Sbjct: 120 KADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGWDTYLS 158
>U35399-1|AAA79061.1| 362|Homo sapiens G protein-coupled receptor
protein.
Length = 362
Score = 30.3 bits (65), Expect = 10.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 855 WVQLAV*HHRSWLENQSDLILFSHLVFTDYYLAVQFL 745
WV + HH +W+ LF + +T+ Y+++ FL
Sbjct: 73 WVDYFL-HHDNWIHGPGSCKLFGFIFYTNIYISIAFL 108
>U21051-1|AAA98457.1| 362|Homo sapiens G protein-coupled receptor
protein.
Length = 362
Score = 30.3 bits (65), Expect = 10.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 855 WVQLAV*HHRSWLENQSDLILFSHLVFTDYYLAVQFL 745
WV + HH +W+ LF + +T+ Y+++ FL
Sbjct: 73 WVDYFL-HHDNWIHGPGSCKLFGFIFYTNIYISIAFL 108
>L36148-1|AAA63180.1| 354|Homo sapiens G protein-coupled receptor
protein.
Length = 354
Score = 30.3 bits (65), Expect = 10.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 855 WVQLAV*HHRSWLENQSDLILFSHLVFTDYYLAVQFL 745
WV + HH +W+ LF + +T+ Y+++ FL
Sbjct: 73 WVDYFL-HHDNWIHGPGSCKLFGFIFYTNIYISIAFL 108
>BC067536-1|AAH67536.1| 362|Homo sapiens G protein-coupled receptor
4 protein.
Length = 362
Score = 30.3 bits (65), Expect = 10.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 855 WVQLAV*HHRSWLENQSDLILFSHLVFTDYYLAVQFL 745
WV + HH +W+ LF + +T+ Y+++ FL
Sbjct: 73 WVDYFL-HHDNWIHGPGSCKLFGFIFYTNIYISIAFL 108
>BC067535-1|AAH67535.1| 362|Homo sapiens G protein-coupled receptor
4 protein.
Length = 362
Score = 30.3 bits (65), Expect = 10.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 855 WVQLAV*HHRSWLENQSDLILFSHLVFTDYYLAVQFL 745
WV + HH +W+ LF + +T+ Y+++ FL
Sbjct: 73 WVDYFL-HHDNWIHGPGSCKLFGFIFYTNIYISIAFL 108
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,740,434
Number of Sequences: 237096
Number of extensions: 2486558
Number of successful extensions: 3634
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3630
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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