Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_I13
         (810 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   3.3  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   3.3  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    23   4.4  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    23   4.4  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    23   4.4  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    23   4.4  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    23   4.4  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    23   4.4  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    23   4.4  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    23   4.4  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    23   4.4  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   7.7  

>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 367 AYRLRQPLNTRWAES 323
           AYRLR PLN R+  +
Sbjct: 173 AYRLRPPLNPRFGST 187


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 367 AYRLRQPLNTRWAES 323
           AYRLR PLN R+  +
Sbjct: 173 AYRLRPPLNPRFGST 187


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 367 AYRLRQPLNTRW 332
           AYRLR PLN R+
Sbjct: 158 AYRLRPPLNPRF 169


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 367 AYRLRQPLNTRW 332
           AYRLR PLN R+
Sbjct: 158 AYRLRPPLNPRF 169


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 367 AYRLRQPLNTRW 332
           AYRLR PLN R+
Sbjct: 158 AYRLRPPLNPRF 169


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 367 AYRLRQPLNTRW 332
           AYRLR PLN R+
Sbjct: 158 AYRLRPPLNPRF 169


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 367 AYRLRQPLNTRW 332
           AYRLR PLN R+
Sbjct: 158 AYRLRPPLNPRF 169


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 367 AYRLRQPLNTRW 332
           AYRLR PLN R+
Sbjct: 158 AYRLRPPLNPRF 169


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 367 AYRLRQPLNTRW 332
           AYRLR PLN R+
Sbjct: 170 AYRLRPPLNPRF 181


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 367 AYRLRQPLNTRW 332
           AYRLR PLN R+
Sbjct: 170 AYRLRPPLNPRF 181


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 367 AYRLRQPLNTRW 332
           AYRLR PLN R+
Sbjct: 398 AYRLRPPLNPRF 409


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 410 KYKNYNFCGN*NEANISISLCRLFFLNCV 496
           KY NYN   N N  N +    +L++ N +
Sbjct: 323 KYSNYNNYNNYNNNNYNNYNKKLYYKNYI 351


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,603
Number of Sequences: 438
Number of extensions: 3674
Number of successful extensions: 71
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)