Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_I12
(801 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81106-1|CAB03221.2| 352|Caenorhabditis elegans Hypothetical pr... 155 3e-38
Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical p... 29 3.9
Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical p... 29 3.9
Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical p... 29 3.9
U80443-7|AAB37678.2| 393|Caenorhabditis elegans Coenzyme q (ubi... 29 3.9
AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication l... 29 3.9
AF068713-9|AAC17800.1| 284|Caenorhabditis elegans Serpentine re... 29 3.9
AC025721-13|AAR85897.1| 139|Caenorhabditis elegans Hypothetical... 29 5.1
Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical p... 28 6.8
Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical p... 28 6.8
Z73973-5|CAA98267.2| 882|Caenorhabditis elegans Hypothetical pr... 28 8.9
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ... 28 8.9
>Z81106-1|CAB03221.2| 352|Caenorhabditis elegans Hypothetical
protein R06C1.2 protein.
Length = 352
Score = 155 bits (376), Expect = 3e-38
Identities = 86/247 (34%), Positives = 138/247 (55%), Gaps = 7/247 (2%)
Frame = -2
Query: 800 MFQAYCIVXDDIMDGSSVRRGMPCWYRRPEVGITCAFXDSLLIHSSLFEFXKTNFRTNPN 621
+ Q++ ++ DDIMD S RRG PCW+RR VG++ A D+ ++ S + + + + N
Sbjct: 90 IIQSFYLIADDIMDNSETRRGKPCWFRREGVGMS-AINDAFIMDSFVEDILRLALPGHVN 148
Query: 620 YMKMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLG 441
++ E + ++ +T +GQ LD + N+ SSFT DR P+ +
Sbjct: 149 LDRLCEAYRKSKQKTLIGQFLDTSSVNQ---ISSFTWDRYELMVENKTSHYTVFHPIQMA 205
Query: 440 LLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQ 261
L++++ + + S + + +IG +FQ QDDF+D +GD TGK+GTDIQ+ KCTWLAV+
Sbjct: 206 LIISDVL--AYHGSVKKVAYQIGFLFQSQDDFLDVYGDPKITGKIGTDIQDGKCTWLAVR 263
Query: 260 ALQRCTEAQR-------TVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNII 102
ALQ+ + FK +GS +P VE+IKR+Y++L L Q ++ EK I
Sbjct: 264 ALQKMHKTPEKWGAKLIEEFKTSFGSVDPEKVEKIKRIYDELQLKQEFRRFEKHFSGEIK 323
Query: 101 RQIENIP 81
+ I IP
Sbjct: 324 KSISEIP 330
>Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -3
Query: 355 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 209
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 481 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 528
>Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -3
Query: 355 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 209
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 481 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 528
>Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical
protein ZK632.1b protein.
Length = 516
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -3
Query: 355 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 209
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 187 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 234
>U80443-7|AAB37678.2| 393|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -2
Query: 437 LLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQ 291
+LA+ D K+++ A + +G FQ+ DD +D + GK V D++
Sbjct: 256 ILADGSDLKLHEIAFEYGRNLGIAFQLADDLLDFIATADEMGKPVAADLK 305
>AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication
licensing factor MCM2/3/5-type protein protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -3
Query: 355 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 209
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 481 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 528
>AF068713-9|AAC17800.1| 284|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 68 protein.
Length = 284
Score = 29.1 bits (62), Expect = 3.9
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +3
Query: 6 LXYCLMLPIVRNIQQLFKEXAGGLYW-YIFNLSYNIVVHRFFLMLVYLREVKVFVKSFYA 182
L L+L I + + FK Y + ++ Y+I + F L ++ + ++F +
Sbjct: 22 LNLILLLAIFCSKRVTFKSELSLFYTRFAADIGYSISISNFKLYILAVMISEIFAVKNFI 81
Query: 183 FHMCWFTATITGFEYCTLCFSTALQRLNCQPSTFALLYICTN 308
F W T I G +L F T L R+ S F + C N
Sbjct: 82 FITLWLT-IIFGIIRTSLLFLTTLDRV---ISLFFPFFYCAN 119
>AC025721-13|AAR85897.1| 139|Caenorhabditis elegans Hypothetical
protein Y48G8AL.15 protein.
Length = 139
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -2
Query: 146 QIY-KHQEKAMYDNIIRQIENIPIEAARV 63
Q+Y +HQ K YD ++R I + P+ A RV
Sbjct: 56 QLYAQHQGKFFYDRLVRHISSGPVIAMRV 84
>Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical
protein C50B6.14b protein.
Length = 420
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 188 VERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENI 84
+ER +R+ +DLHL I K DNI++ IE++
Sbjct: 383 LERQQRMQKDLHLLYIAPLVAKTPKDNIVQIIEDV 417
>Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical
protein C50B6.14a protein.
Length = 399
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 188 VERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENI 84
+ER +R+ +DLHL I K DNI++ IE++
Sbjct: 362 LERQQRMQKDLHLLYIAPLVAKTPKDNIVQIIEDV 396
>Z73973-5|CAA98267.2| 882|Caenorhabditis elegans Hypothetical
protein F25D1.4 protein.
Length = 882
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 21 MLPIVRNIQQLFKEXAGGL--YWYIFNLSYNIVVHRFFLMLVYLREVKVFVKSFYAFHMC 194
M+P+VRN+QQL E + IF +S N H + + R + F+ FY++
Sbjct: 435 MIPVVRNVQQLADELQLFVKEASEIFGVSDNF--HDVKCLSLDGRTYESFINQFYSYEPT 492
Query: 195 W 197
W
Sbjct: 493 W 493
>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
protein Y42A5A.1 protein.
Length = 1045
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 27 PIVRNIQQLFKEXAGGLYWYIFNLSYNIVVHRFFLMLVYLREVKVFV 167
PI N +L LY +I N ++ + + + + L+Y E+K+FV
Sbjct: 124 PIFTNSTELITTTEDPLYVHINNTNHRLQIPQIHIPLLYEVELKLFV 170
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,939,316
Number of Sequences: 27780
Number of extensions: 367919
Number of successful extensions: 1019
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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