Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_I03
         (319 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006662-3|AAF39895.1|  368|Caenorhabditis elegans Hypothetical ...    34   0.025
Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical pr...    28   1.3  
U41538-5|AAG00012.2|  762|Caenorhabditis elegans Hypothetical pr...    28   1.7  
AF098997-10|AAC68712.2|  325|Caenorhabditis elegans Serpentine r...    27   2.2  
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ...    27   2.9  
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ...    27   2.9  
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr...    27   3.9  
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re...    27   3.9  
AF067211-8|ABB51202.1|   99|Caenorhabditis elegans Hypothetical ...    27   3.9  
Z83731-6|CAN86605.2|  208|Caenorhabditis elegans Hypothetical pr...    26   5.1  
Z83731-5|CAN86604.2|  223|Caenorhabditis elegans Hypothetical pr...    26   5.1  
AL031633-19|CAA21031.1|  710|Caenorhabditis elegans Hypothetical...    26   6.8  
AF098997-9|AAC68720.1|  325|Caenorhabditis elegans Serpentine re...    26   6.8  
Z81512-1|CAB04173.1|  601|Caenorhabditis elegans Hypothetical pr...    25   8.9  
U88315-8|AAN84845.1|  472|Caenorhabditis elegans Nematode astaci...    25   8.9  
U88315-7|AAL16314.1|  546|Caenorhabditis elegans Nematode astaci...    25   8.9  
U88315-6|AAB42372.1|  517|Caenorhabditis elegans Nematode astaci...    25   8.9  
U53139-5|AAK18933.2|  322|Caenorhabditis elegans Serpentine rece...    25   8.9  
U12964-4|AAA91219.3|  447|Caenorhabditis elegans Temporarily ass...    25   8.9  

>AC006662-3|AAF39895.1|  368|Caenorhabditis elegans Hypothetical
           protein H23L24.4 protein.
          Length = 368

 Score = 33.9 bits (74), Expect = 0.025
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +1

Query: 205 IWLLARSKFLIPNILF*YNYSSKCSLKFFYVKLTINS 315
           +W    SK+L+PN +F Y  SS C+  + +V L ++S
Sbjct: 35  LWDRTYSKYLLPNSIFLYKRSSTCTRTYIFVILRLSS 71


>Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical
           protein Y70C5A.2 protein.
          Length = 1037

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +1

Query: 145 LFLGGVQITLMFLCWATFLKIWLLA 219
           LFL G+Q+TL+F C+  FL I  LA
Sbjct: 214 LFLLGIQVTLLF-CFLLFLPICFLA 237


>U41538-5|AAG00012.2|  762|Caenorhabditis elegans Hypothetical
           protein R04E5.2 protein.
          Length = 762

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -3

Query: 215 NNQIFKNVAQQRNMSVICTPPRNKVSRGEM-IFLASLM 105
           N + F+N+ Q+    V+  PP+N  S G + +F A +M
Sbjct: 572 NPKAFENLIQRNIREVLIVPPKNSTSPGTLNLFEAGVM 609


>AF098997-10|AAC68712.2|  325|Caenorhabditis elegans Serpentine
           receptor, class i protein43 protein.
          Length = 325

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 136 LETLFLGGVQITLMFLCWATFLKIWLLARSKFLIPNILF 252
           + T  L G+Q  L+FLC+A   +     +   +IP ILF
Sbjct: 91  ITTHLLLGIQYVLLFLCFARRHQAIAKIKQHHVIPEILF 129


>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
           protein Y47D3B.5b protein.
          Length = 1136

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 10/32 (31%), Positives = 22/32 (68%)
 Frame = -3

Query: 116 ASLMVVGWSAIPAWVLVNIKHYRDKQIKLSQK 21
           AS+++V +S + AWV    +H  ++++KL ++
Sbjct: 147 ASVLLVLYSFLGAWVFYLFEHDYEREVKLKER 178


>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
           protein Y47D3B.5a protein.
          Length = 1088

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 10/32 (31%), Positives = 22/32 (68%)
 Frame = -3

Query: 116 ASLMVVGWSAIPAWVLVNIKHYRDKQIKLSQK 21
           AS+++V +S + AWV    +H  ++++KL ++
Sbjct: 147 ASVLLVLYSFLGAWVFYLFEHDYEREVKLKER 178


>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
            F29D11.1 protein.
          Length = 4753

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 10   DYIFFCDNFICLSR 51
            DY+F CDN  C+SR
Sbjct: 3009 DYLFQCDNLKCISR 3022


>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
            protein protein.
          Length = 4753

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 10   DYIFFCDNFICLSR 51
            DY+F CDN  C+SR
Sbjct: 3009 DYLFQCDNLKCISR 3022


>AF067211-8|ABB51202.1|   99|Caenorhabditis elegans Hypothetical
           protein B0205.13 protein.
          Length = 99

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 72  HPGWDGRPAHHHQAGEEDHLTSGNLVSWRSADNAHVP 182
           HP W+    HHHQ   + H  + N V+ ++A +  +P
Sbjct: 54  HPWWN----HHHQCWHQYHHRTENTVNSQNAPSQVIP 86


>Z83731-6|CAN86605.2|  208|Caenorhabditis elegans Hypothetical
           protein M04C9.1b protein.
          Length = 208

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 102 HHQAGEEDHLTSGNLVSWRSADN 170
           +HQ  E+ +L  GN VS  S DN
Sbjct: 100 YHQKDEKGYLPEGNKVSCESVDN 122


>Z83731-5|CAN86604.2|  223|Caenorhabditis elegans Hypothetical
           protein M04C9.1a protein.
          Length = 223

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 102 HHQAGEEDHLTSGNLVSWRSADN 170
           +HQ  E+ +L  GN VS  S DN
Sbjct: 115 YHQKDEKGYLPEGNKVSCESVDN 137


>AL031633-19|CAA21031.1|  710|Caenorhabditis elegans Hypothetical
           protein Y39A1A.22 protein.
          Length = 710

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = -3

Query: 155 PRNKVSRGEMIFLASLMVVGWS-AIPAWVLVNIKH 54
           PRN +S   ++ +AS M++ WS A+ A++  ++ H
Sbjct: 299 PRNHLSYQTLMQIASFMIMLWSFAVLAYLYAHMLH 333


>AF098997-9|AAC68720.1|  325|Caenorhabditis elegans Serpentine
           receptor, class i protein42 protein.
          Length = 325

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 157 GVQITLMFLCWATFLKIWLLARSKFLIPNIL 249
           GVQ  L+FLC+A   +     + + +IPN L
Sbjct: 98  GVQYVLLFLCFARRHQAIAKIKQQHVIPNFL 128


>Z81512-1|CAB04173.1|  601|Caenorhabditis elegans Hypothetical
           protein F25C8.1 protein.
          Length = 601

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -3

Query: 158 PPRNKVSRGEMIFLASLMV 102
           PP +K++ G M+F+ S+MV
Sbjct: 277 PPHSKLAYGGMVFVRSMMV 295


>U88315-8|AAN84845.1|  472|Caenorhabditis elegans Nematode astacin
           protease protein9, isoform c protein.
          Length = 472

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = -3

Query: 155 PRNKVSRGEMI--FLASLMVVGWSAIPAWVLVNIKHYRDKQIK 33
           P+N  ++ E++   LA    VG  A PA   VN++  R +Q+K
Sbjct: 124 PQNTQAKQELLTKMLAFDQAVGGKAAPAHDKVNLRFDRTQQVK 166


>U88315-7|AAL16314.1|  546|Caenorhabditis elegans Nematode astacin
           protease protein9, isoform b protein.
          Length = 546

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = -3

Query: 155 PRNKVSRGEMI--FLASLMVVGWSAIPAWVLVNIKHYRDKQIK 33
           P+N  ++ E++   LA    VG  A PA   VN++  R +Q+K
Sbjct: 198 PQNTQAKQELLTKMLAFDQAVGGKAAPAHDKVNLRFDRTQQVK 240


>U88315-6|AAB42372.1|  517|Caenorhabditis elegans Nematode astacin
           protease protein9, isoform a protein.
          Length = 517

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = -3

Query: 155 PRNKVSRGEMI--FLASLMVVGWSAIPAWVLVNIKHYRDKQIK 33
           P+N  ++ E++   LA    VG  A PA   VN++  R +Q+K
Sbjct: 198 PQNTQAKQELLTKMLAFDQAVGGKAAPAHDKVNLRFDRTQQVK 240


>U53139-5|AAK18933.2|  322|Caenorhabditis elegans Serpentine
           receptor, class xa protein4 protein.
          Length = 322

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 187 WATFLKIWLLARSKFLIPNILF*YNYSSKCSLKF 288
           W T +K+ L + S  LI  ++    Y S+CSL F
Sbjct: 127 WFTDIKLALYSMSIMLILFVVLLIPYYSECSLNF 160


>U12964-4|AAA91219.3|  447|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 340 protein.
          Length = 447

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +1

Query: 124 IISPLETLFLGGVQITLMFLCWATFLKIWLLARSKFLIPNILF*YNYSS 270
           +++ L  L LG V    +   W T +    LA S +++  +LF +N+SS
Sbjct: 75  LLAVLRMLILGVVYGICLVKQWYT-VAFTTLASSAYILMKVLFYFNHSS 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,545,612
Number of Sequences: 27780
Number of extensions: 146942
Number of successful extensions: 377
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 377
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)