Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_G12
(891 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10117-1|AAA62202.1| 312|Homo sapiens endothelial-monocyte acti... 182 1e-45
CR542281-1|CAG47076.1| 312|Homo sapiens SCYE1 protein. 181 3e-45
BC014051-1|AAH14051.1| 312|Homo sapiens small inducible cytokin... 181 3e-45
U89436-1|AAB88409.1| 528|Homo sapiens tyrosyl-tRNA synthetase p... 151 4e-36
BC016689-1|AAH16689.1| 528|Homo sapiens tyrosyl-tRNA synthetase... 151 4e-36
BC004151-1|AAH04151.1| 528|Homo sapiens tyrosyl-tRNA synthetase... 151 4e-36
BC001933-1|AAH01933.1| 528|Homo sapiens tyrosyl-tRNA synthetase... 151 4e-36
AK223608-1|BAD97328.1| 528|Homo sapiens tyrosyl-tRNA synthetase... 151 4e-36
>U10117-1|AAA62202.1| 312|Homo sapiens endothelial-monocyte
activating polypeptide II protein.
Length = 312
Score = 182 bits (444), Expect = 1e-45
Identities = 101/233 (43%), Positives = 134/233 (57%), Gaps = 17/233 (7%)
Frame = -3
Query: 739 ENNTLSAKVNAAKAELIGLEISHGKRQYAIPGKTDLLETTKI---------VTTI----Q 599
EN L ++ K ELI EI +G +Q A P T L + + VTT+ +
Sbjct: 51 ENAKLKKEIEELKQELIQAEIQNGVKQIAFPSGTPLHANSMVSENVIQSTAVTTVSSGTK 110
Query: 598 DSVCXXXXXXXXXXXXXXXXXXXXXXXXXXSADIA----VDVRKLDFRIGKIVEISKHPD 431
+ + A A +DV +LD RIG I+ KHPD
Sbjct: 111 EQIKGGTGDEKKAKEKIEKKGEKKEKKQQSIAGSADSKPIDVSRLDLRIGCIITARKHPD 170
Query: 430 ADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMVLCNLKPVKMRGVTSEAMVMCA 251
ADSLYVE++D GE PRTVVSGLVNHVP+++M+ R+V++LCNLKP KMRGV S+AMVMCA
Sbjct: 171 ADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILLCNLKPAKMRGVLSQAMVMCA 230
Query: 250 SSAEKVEVLIPPPDAIPGDLVVCEGYPREPEAVLXPKKKXFETCAPDLKTXNE 92
SS EK+E+L PP ++PGD + + +P EP+ L PKKK +E PDL T +E
Sbjct: 231 SSPEKIEILAPPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNDE 283
>CR542281-1|CAG47076.1| 312|Homo sapiens SCYE1 protein.
Length = 312
Score = 181 bits (441), Expect = 3e-45
Identities = 81/134 (60%), Positives = 104/134 (77%)
Frame = -3
Query: 493 VDVRKLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMV 314
+DV +LD RIG I+ KHPDADSLYVE++D GE PRTVVSGLVNHVP+++M+ R+V++
Sbjct: 150 IDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVIL 209
Query: 313 LCNLKPVKMRGVTSEAMVMCASSAEKVEVLIPPPDAIPGDLVVCEGYPREPEAVLXPKKK 134
LCNLKP KMRGV S+AMVMCASS EK+E+L PP ++PGD + + +P EP+ L PKKK
Sbjct: 210 LCNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVPGDRITFDAFPGEPDKELNPKKK 269
Query: 133 XFETCAPDLKTXNE 92
+E PDL T +E
Sbjct: 270 IWEQIQPDLHTNDE 283
>BC014051-1|AAH14051.1| 312|Homo sapiens small inducible cytokine
subfamily E, member 1 (endothelial monocyte-activating
protein.
Length = 312
Score = 181 bits (441), Expect = 3e-45
Identities = 81/134 (60%), Positives = 104/134 (77%)
Frame = -3
Query: 493 VDVRKLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMV 314
+DV +LD RIG I+ KHPDADSLYVE++D GE PRTVVSGLVNHVP+++M+ R+V++
Sbjct: 150 IDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVIL 209
Query: 313 LCNLKPVKMRGVTSEAMVMCASSAEKVEVLIPPPDAIPGDLVVCEGYPREPEAVLXPKKK 134
LCNLKP KMRGV S+AMVMCASS EK+E+L PP ++PGD + + +P EP+ L PKKK
Sbjct: 210 LCNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVPGDRITFDAFPGEPDKELNPKKK 269
Query: 133 XFETCAPDLKTXNE 92
+E PDL T +E
Sbjct: 270 IWEQIQPDLHTNDE 283
>U89436-1|AAB88409.1| 528|Homo sapiens tyrosyl-tRNA synthetase
protein.
Length = 528
Score = 151 bits (365), Expect = 4e-36
Identities = 74/134 (55%), Positives = 94/134 (70%), Gaps = 4/134 (2%)
Frame = -3
Query: 481 KLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMVLCNL 302
+LD R+GKI+ + KHPDADSLYVEKID GE PRTVVSGLV VP +E+++R+V+VLCNL
Sbjct: 367 RLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNL 426
Query: 301 KPVKMRGVTSEAMVMCASSA---EKVEVLIPPPDAIPGDLVVCEGYPR-EPEAVLXPKKK 134
KP KMRGV S+ M++CAS +VE L PP + PG+ V +GY + +P+ L PKKK
Sbjct: 427 KPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSAPGEHVFVKGYEKGQPDEELKPKKK 486
Query: 133 XFETCAPDLKTXNE 92
FE D K E
Sbjct: 487 VFEKLQADFKISEE 500
>BC016689-1|AAH16689.1| 528|Homo sapiens tyrosyl-tRNA synthetase
protein.
Length = 528
Score = 151 bits (365), Expect = 4e-36
Identities = 74/134 (55%), Positives = 94/134 (70%), Gaps = 4/134 (2%)
Frame = -3
Query: 481 KLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMVLCNL 302
+LD R+GKI+ + KHPDADSLYVEKID GE PRTVVSGLV VP +E+++R+V+VLCNL
Sbjct: 367 RLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNL 426
Query: 301 KPVKMRGVTSEAMVMCASSA---EKVEVLIPPPDAIPGDLVVCEGYPR-EPEAVLXPKKK 134
KP KMRGV S+ M++CAS +VE L PP + PG+ V +GY + +P+ L PKKK
Sbjct: 427 KPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSAPGEHVFVKGYEKGQPDEELKPKKK 486
Query: 133 XFETCAPDLKTXNE 92
FE D K E
Sbjct: 487 VFEKLQADFKISEE 500
>BC004151-1|AAH04151.1| 528|Homo sapiens tyrosyl-tRNA synthetase
protein.
Length = 528
Score = 151 bits (365), Expect = 4e-36
Identities = 74/134 (55%), Positives = 94/134 (70%), Gaps = 4/134 (2%)
Frame = -3
Query: 481 KLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMVLCNL 302
+LD R+GKI+ + KHPDADSLYVEKID GE PRTVVSGLV VP +E+++R+V+VLCNL
Sbjct: 367 RLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNL 426
Query: 301 KPVKMRGVTSEAMVMCASSA---EKVEVLIPPPDAIPGDLVVCEGYPR-EPEAVLXPKKK 134
KP KMRGV S+ M++CAS +VE L PP + PG+ V +GY + +P+ L PKKK
Sbjct: 427 KPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSAPGEHVFVKGYEKGQPDEELKPKKK 486
Query: 133 XFETCAPDLKTXNE 92
FE D K E
Sbjct: 487 VFEKLQADFKISEE 500
>BC001933-1|AAH01933.1| 528|Homo sapiens tyrosyl-tRNA synthetase
protein.
Length = 528
Score = 151 bits (365), Expect = 4e-36
Identities = 74/134 (55%), Positives = 94/134 (70%), Gaps = 4/134 (2%)
Frame = -3
Query: 481 KLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMVLCNL 302
+LD R+GKI+ + KHPDADSLYVEKID GE PRTVVSGLV VP +E+++R+V+VLCNL
Sbjct: 367 RLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNL 426
Query: 301 KPVKMRGVTSEAMVMCASSA---EKVEVLIPPPDAIPGDLVVCEGYPR-EPEAVLXPKKK 134
KP KMRGV S+ M++CAS +VE L PP + PG+ V +GY + +P+ L PKKK
Sbjct: 427 KPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSAPGEHVFVKGYEKGQPDEELKPKKK 486
Query: 133 XFETCAPDLKTXNE 92
FE D K E
Sbjct: 487 VFEKLQADFKISEE 500
>AK223608-1|BAD97328.1| 528|Homo sapiens tyrosyl-tRNA synthetase
variant protein.
Length = 528
Score = 151 bits (365), Expect = 4e-36
Identities = 74/134 (55%), Positives = 94/134 (70%), Gaps = 4/134 (2%)
Frame = -3
Query: 481 KLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMVLCNL 302
+LD R+GKI+ + KHPDADSLYVEKID GE PRTVVSGLV VP +E+++R+V+VLCNL
Sbjct: 367 RLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNL 426
Query: 301 KPVKMRGVTSEAMVMCASSA---EKVEVLIPPPDAIPGDLVVCEGYPR-EPEAVLXPKKK 134
KP KMRGV S+ M++CAS +VE L PP + PG+ V +GY + +P+ L PKKK
Sbjct: 427 KPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSAPGEHVFVKGYEKGQPDEELKPKKK 486
Query: 133 XFETCAPDLKTXNE 92
FE D K E
Sbjct: 487 VFEKLQADFKISEE 500
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,270,873
Number of Sequences: 237096
Number of extensions: 2038560
Number of successful extensions: 3772
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3767
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -