Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_G12
         (891 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73427-5|CAA97803.1|  917|Caenorhabditis elegans Hypothetical pr...   182   4e-46
AL031633-6|CAA21014.3|  225|Caenorhabditis elegans Hypothetical ...    31   1.1  
U97403-2|AAB52472.2|  649|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z46241-4|CAA86318.1|  837|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z73427-5|CAA97803.1|  917|Caenorhabditis elegans Hypothetical protein
            F58B3.5 protein.
          Length = 917

 Score =  182 bits (442), Expect = 4e-46
 Identities = 104/256 (40%), Positives = 141/256 (55%), Gaps = 4/256 (1%)
 Frame = -3

Query: 847  LINNADIAXKRLAELRKKLEEVXKFXIEXKIXQLIQENNTLSAKVNAAKAELIGLEISHG 668
            L   A +  + +A+  KK ++        ++ +L  EN  L+  V   + +LI LE + G
Sbjct: 633  LEQGAKVISQLIAQNLKKFDQAKALFTRNQLQRLDGENKQLTIDVKTLQHQLIELETAAG 692

Query: 667  KRQYAIP--GKTDLLETTKIVTTIQDSVCXXXXXXXXXXXXXXXXXXXXXXXXXXSA--D 500
             +Q   P    T    +T     I ++                            +A  D
Sbjct: 693  IKQVPKPVVSCTPTPTSTPASGIITEAPKKEAPSTPAPSEPKKAKEQKKGKGGAAAAPVD 752

Query: 499  IAVDVRKLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIV 320
              +DV +LD R+G+I++  KHPDAD+LYVE+ID GE  PRTVVSGLV HVP+D+M+ R+V
Sbjct: 753  DTIDVGRLDMRVGRIIKCEKHPDADALYVEQIDVGESAPRTVVSGLVRHVPLDQMQNRLV 812

Query: 319  MVLCNLKPVKMRGVTSEAMVMCASSAEKVEVLIPPPDAIPGDLVVCEGYPREPEAVLXPK 140
            +VLCNLKP KMRGV S AMVMCASS +KVE++  P D+ PG  VVC  Y   P+  L PK
Sbjct: 813  VVLCNLKPAKMRGVESRAMVMCASSPDKVEIMEVPADSKPGTPVVCPPYTHRPDEQLNPK 872

Query: 139  KKXFETCAPDLKTXNE 92
            KK +ET A DLK   E
Sbjct: 873  KKIWETVAEDLKVSAE 888


>AL031633-6|CAA21014.3|  225|Caenorhabditis elegans Hypothetical
           protein Y39A1A.8 protein.
          Length = 225

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 560 LFIDNWFFITNGILNSCNNLGCFQQVCFTRY 652
           LFI       + ++  CN +GCF Q C+  Y
Sbjct: 58  LFIQYGLLKDDDVITYCNGIGCFLQACYLMY 88


>U97403-2|AAB52472.2|  649|Caenorhabditis elegans Hypothetical
           protein T10E9.4 protein.
          Length = 649

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 666 FPCDISKPINSAFAAFTFAD 725
           +PCD +KPI S F+ + F D
Sbjct: 471 YPCDANKPIPSQFSTYAFCD 490


>Z46241-4|CAA86318.1|  837|Caenorhabditis elegans Hypothetical
           protein C38D4.5 protein.
          Length = 837

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
 Frame = -3

Query: 340 EMRERIVMVLCNLKPVKMRGVTSEAMVMCASSAEKVEVLIPPPDAIPGDLV-VCEGYPRE 164
           + R+ I + LCN K   +RG      V    S E+V   +P P +    ++ V  G  R 
Sbjct: 468 KQRKYIQLELCNTKKYLLRGPNDTEAVEWYKSLEEVVAKLPSPGSSNQPMIDVTNGVARN 527

Query: 163 PEAV 152
           P  +
Sbjct: 528 PSYI 531


>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
           protein F59A2.6 protein.
          Length = 1133

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = -3

Query: 847 LINNADIAXKRLAELRKKLEEVXKFXIEXKI-XQLIQENNTLSAKVNAAKAELIGLEISH 671
           LIN      + +  L++KLEEV K   + ++  QL+ E+ T   K +A  AE++  ++  
Sbjct: 202 LINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEE 261

Query: 670 GK 665
            +
Sbjct: 262 AQ 263


>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
           protein F59A2.6 protein.
          Length = 1133

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = -3

Query: 847 LINNADIAXKRLAELRKKLEEVXKFXIEXKI-XQLIQENNTLSAKVNAAKAELIGLEISH 671
           LIN      + +  L++KLEEV K   + ++  QL+ E+ T   K +A  AE++  ++  
Sbjct: 202 LINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEE 261

Query: 670 GK 665
            +
Sbjct: 262 AQ 263


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,589,560
Number of Sequences: 27780
Number of extensions: 319388
Number of successful extensions: 893
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)