Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_G12
         (891 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.7  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   4.9  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   6.5  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   6.5  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 625 FPAGLFYQVSHTASFRVIFPN 687
           FPA  F Q  H+A++R +  N
Sbjct: 92  FPAAAFRQDVHSAAYRCVASN 112


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 625 FPAGLFYQVSHTASFRVIFPN 687
           FPA  F Q  H+A++R +  N
Sbjct: 92  FPAAAFRQDVHSAAYRCVASN 112


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 633 CWKQPRLLQLFKIPFVMKNQLSIK 562
           CW + RLL    I  V KN+ +++
Sbjct: 327 CWNENRLLDRRNIEVVAKNKETLQ 350


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -3

Query: 265 MVMCASSAEKVEVLIPP-PDAIPGDLVVCEGYPR 167
           +V C  +   V+    P P+ +  DL+V + YPR
Sbjct: 5   IVFCLMALSIVDAAWKPLPENLKEDLIVYQVYPR 38


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -3

Query: 265 MVMCASSAEKVEVLIPP-PDAIPGDLVVCEGYPR 167
           +V C  +   V+    P P+ +  DL+V + YPR
Sbjct: 5   IVFCLMALSIVDAAWKPLPENLKEDLIVYQVYPR 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,402
Number of Sequences: 438
Number of extensions: 3766
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)