Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_G11
         (775 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3481|AAF46909.2|  467|Drosophila melanogaster CG12490-P...    29   7.1  
AF181640-1|AAD55426.1|  852|Drosophila melanogaster BcDNA.GH0981...    29   9.4  
AE014134-398|AAN10427.1|  852|Drosophila melanogaster CG4272-PB,...    29   9.4  
AE014134-397|AAF51264.2|  852|Drosophila melanogaster CG4272-PA,...    29   9.4  

>AE013599-3481|AAF46909.2|  467|Drosophila melanogaster CG12490-PA
           protein.
          Length = 467

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = -3

Query: 695 TRCCAKLGVDRLNASTPVQCDVSRDMAAGTLPLFDVSLP*CTFYVLLTYVIMVYSTLL 522
           TRCCA  G+  L A  P   +   DM   +   F  +LP    ++ ++YV ++ + +L
Sbjct: 244 TRCCATWGLSTLQAQIPTYMNGVLDMDMKSNAFFS-ALPFLAMWI-MSYVYLIIADVL 299


>AF181640-1|AAD55426.1|  852|Drosophila melanogaster BcDNA.GH09817
           protein.
          Length = 852

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = +1

Query: 580 GSETSKSGKVPAAMSRETSHCTGVEAFSRSTPSLAQHRVAAVTSP*RHSARYKSATLSGG 759
           G+    +   PA +S   +  +G E  S STP  +  R++ +    +H+    +A ++  
Sbjct: 705 GNPVGSATASPATVSSSPATASGNEFISLSTPIASSSRLSQINDLLQHNRNTTAALVAVS 764

Query: 760 AGLS 771
            GLS
Sbjct: 765 EGLS 768


>AE014134-398|AAN10427.1|  852|Drosophila melanogaster CG4272-PB,
           isoform B protein.
          Length = 852

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = +1

Query: 580 GSETSKSGKVPAAMSRETSHCTGVEAFSRSTPSLAQHRVAAVTSP*RHSARYKSATLSGG 759
           G+    +   PA +S   +  +G E  S STP  +  R++ +    +H+    +A ++  
Sbjct: 705 GNPVGSATASPATVSSSPATASGNEFISLSTPIASSSRLSQINDLLQHNRNTTAALVAVS 764

Query: 760 AGLS 771
            GLS
Sbjct: 765 EGLS 768


>AE014134-397|AAF51264.2|  852|Drosophila melanogaster CG4272-PA,
           isoform A protein.
          Length = 852

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = +1

Query: 580 GSETSKSGKVPAAMSRETSHCTGVEAFSRSTPSLAQHRVAAVTSP*RHSARYKSATLSGG 759
           G+    +   PA +S   +  +G E  S STP  +  R++ +    +H+    +A ++  
Sbjct: 705 GNPVGSATASPATVSSSPATASGNEFISLSTPIASSSRLSQINDLLQHNRNTTAALVAVS 764

Query: 760 AGLS 771
            GLS
Sbjct: 765 EGLS 768


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,960,997
Number of Sequences: 53049
Number of extensions: 576066
Number of successful extensions: 1606
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1606
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)