Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_G09
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81458-3|CAB03823.2| 487|Caenorhabditis elegans Hypothetical pr... 30 1.9
AY954523-1|AAX34431.1| 729|Caenorhabditis elegans anion transpo... 30 1.9
AY887907-1|AAX34419.1| 729|Caenorhabditis elegans anion transpo... 30 1.9
AF251126-1|AAF71273.1| 487|Caenorhabditis elegans UDP-GlcNAc:a-... 30 1.9
AC006625-1|AAK68277.2| 729|Caenorhabditis elegans Sulfate perme... 30 1.9
Z81058-6|CAB62801.2| 252|Caenorhabditis elegans Hypothetical pr... 29 5.8
U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein. 28 7.7
AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z81458-3|CAB03823.2| 487|Caenorhabditis elegans Hypothetical
protein C03E10.4 protein.
Length = 487
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 395 NLTNGRVLTMFYPYNFEFFCTV 330
N+T RV +FYPYN + F TV
Sbjct: 173 NITFARVYQIFYPYNLQLFPTV 194
>AY954523-1|AAX34431.1| 729|Caenorhabditis elegans anion
transporter SULP-1b protein.
Length = 729
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +2
Query: 167 SYTHLTNMHDCCRFYAAKHSNLPIKTAFIPNSTTGTLISNLMVGAGLHKVYRLQLQCKKI 346
S++HL+++ CC F LP++ F ST+ +S VG + V+R Q
Sbjct: 149 SHSHLSSISLCCAFIQLMQFLLPLEFIFSYISTSA--LSGFSVGLFIRIVFRFLPQFLVF 206
Query: 347 QNYMDKTLSKLG 382
+ + K+ S +G
Sbjct: 207 RGHDCKSTSAVG 218
>AY887907-1|AAX34419.1| 729|Caenorhabditis elegans anion
transporter SULP-1a protein.
Length = 729
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +2
Query: 167 SYTHLTNMHDCCRFYAAKHSNLPIKTAFIPNSTTGTLISNLMVGAGLHKVYRLQLQCKKI 346
S++HL+++ CC F LP++ F ST+ +S VG + V+R Q
Sbjct: 149 SHSHLSSISLCCAFIQLMQFLLPLEFIFSYISTSA--LSGFSVGLFIRIVFRFLPQFLVF 206
Query: 347 QNYMDKTLSKLG 382
+ + K+ S +G
Sbjct: 207 RGHDCKSTSAVG 218
>AF251126-1|AAF71273.1| 487|Caenorhabditis elegans
UDP-GlcNAc:a-6-D-mannoside
b1,2-N-acetylglucosaminyltransferase II protein.
Length = 487
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 395 NLTNGRVLTMFYPYNFEFFCTV 330
N+T RV +FYPYN + F TV
Sbjct: 173 NITFARVYQIFYPYNLQLFPTV 194
>AC006625-1|AAK68277.2| 729|Caenorhabditis elegans Sulfate permease
family protein 1 protein.
Length = 729
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +2
Query: 167 SYTHLTNMHDCCRFYAAKHSNLPIKTAFIPNSTTGTLISNLMVGAGLHKVYRLQLQCKKI 346
S++HL+++ CC F LP++ F ST+ +S VG + V+R Q
Sbjct: 149 SHSHLSSISLCCAFIQLMQFLLPLEFIFSYISTSA--LSGFSVGLFIRIVFRFLPQFLVF 206
Query: 347 QNYMDKTLSKLG 382
+ + K+ S +G
Sbjct: 207 RGHDCKSTSAVG 218
>Z81058-6|CAB62801.2| 252|Caenorhabditis elegans Hypothetical
protein F11E6.6 protein.
Length = 252
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 386 WLSLVCTRQFIITFYI*LQ*SPPHKPHI 469
W+ +C FIITF+I L+ S H P +
Sbjct: 196 WVIAICFHVFIITFFIELRFSYLHSPKV 223
>U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical
protein T27A3.2 protein.
Length = 789
Score = 28.7 bits (61), Expect = 5.8
Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 3/93 (3%)
Frame = +2
Query: 95 FEHKTFKLKIFCIRGCRVLKD---KMPSYTHLTNMHDCCRFYAAKHSNLPIKTAFIPNST 265
F TF KIF + KD K Y L N H CR +A + T F+ +
Sbjct: 16 FIRPTFDQKIFKDQCAYCFKDPHGKDGLYISLKNYHAFCREHAEIYGTTSGNTLFVQFES 75
Query: 266 TGTLISNLMVGAGLHKVYRLQLQCKKIQNYMDK 364
T +I G K+ +L + + DK
Sbjct: 76 TKKIIEERTDGEPTSKMTKLTIDSDPKFEFEDK 108
>AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein.
Length = 542
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 21 HNDTSYHISADSLSKLVTLFVTNLNSN 101
HN++ H+SAD S L +L V +L+SN
Sbjct: 78 HNNSITHLSADVFSTLPSLRVLDLSSN 104
>AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical
protein Y71F9B.8 protein.
Length = 542
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 21 HNDTSYHISADSLSKLVTLFVTNLNSN 101
HN++ H+SAD S L +L V +L+SN
Sbjct: 78 HNNSITHLSADVFSTLPSLRVLDLSSN 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,747,798
Number of Sequences: 27780
Number of extensions: 463419
Number of successful extensions: 865
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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