Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_G01
(856 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein. 196 1e-49
M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl ... 195 2e-49
D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein. 195 2e-49
BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate sy... 195 2e-49
AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate sy... 195 2e-49
Z47055-1|CAA87327.1| 348|Homo sapiens farnesyl pyrophosphate sy... 177 4e-44
BC050292-1|AAH50292.1| 298|Homo sapiens LOC619190 protein protein. 164 4e-40
M87434-1|AAA60607.1| 727|Homo sapiens 71 kDa 2'5' oligoadenylat... 30 9.3
M87284-1|AAA60606.1| 687|Homo sapiens 2'5' oligoadenylate synth... 30 9.3
BC049215-1|AAH49215.1| 687|Homo sapiens 2'-5'-oligoadenylate sy... 30 9.3
AL365315-2|CAH71926.1| 212|Homo sapiens potassium channel tetra... 30 9.3
>J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein.
Length = 353
Score = 196 bits (477), Expect = 1e-49
Identities = 102/265 (38%), Positives = 145/265 (54%), Gaps = 1/265 (0%)
Frame = -1
Query: 847 GMVCRMFQAYCXVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNF 668
G + QA+ V DDIMD S RRG CWY++P VG+ A ND+ L+ + ++ LK
Sbjct: 89 GWCVELLQAFFLVADDIMDSSLTRRGQTCWYQKPGVGLD-AINDANLLEACIYRLLKLYC 147
Query: 667 RTNPNYMKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXYN 491
R P Y+ + ELF ++ ++T +GQ LD +T + D FT R +
Sbjct: 148 REQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFY 207
Query: 490 LPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKC 311
LP++ + +A EK + +A+ I LE+G FQIQDD++D FGD TGK+GTDIQ+ KC
Sbjct: 208 LPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKC 267
Query: 310 TWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIR 131
+WL VQ LQR T Q + K YG E V R+K LYE+L LP ++ E+ Y +I+
Sbjct: 268 SWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIMA 327
Query: 130 QIENIPIEAARVLFKKLLDITYNRQ 56
IE +F L Y R+
Sbjct: 328 LIEQYAAPLPPAVFLGLARKIYKRR 352
>M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl
pyrophosphate synthetase mRNA (hpt807), 3' end. ).
Length = 346
Score = 195 bits (475), Expect = 2e-49
Identities = 102/265 (38%), Positives = 145/265 (54%), Gaps = 1/265 (0%)
Frame = -1
Query: 847 GMVCRMFQAYCXVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNF 668
G + QA+ V DDIMD S RRG CWY++P VG+ A ND+ L+ + ++ LK
Sbjct: 82 GWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLKLYC 140
Query: 667 RTNPNYMKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXYN 491
R P Y+ + ELF ++ ++T +GQ LD +T + D FT R +
Sbjct: 141 REQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFY 200
Query: 490 LPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKC 311
LP++ + +A EK + +A+ I LE+G FQIQDD++D FGD TGK+GTDIQ+ KC
Sbjct: 201 LPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKC 260
Query: 310 TWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIR 131
+WL VQ LQR T Q + K YG E V R+K LYE+L LP ++ E+ Y +I+
Sbjct: 261 SWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIMA 320
Query: 130 QIENIPIEAARVLFKKLLDITYNRQ 56
IE +F L Y R+
Sbjct: 321 LIEQYAAPLPPAVFLGLARKIYKRR 345
>D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein.
Length = 420
Score = 195 bits (475), Expect = 2e-49
Identities = 102/265 (38%), Positives = 145/265 (54%), Gaps = 1/265 (0%)
Frame = -1
Query: 847 GMVCRMFQAYCXVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNF 668
G + QA+ V DDIMD S RRG CWY++P VG+ A ND+ L+ + ++ LK
Sbjct: 156 GWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLKLYC 214
Query: 667 RTNPNYMKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXYN 491
R P Y+ + ELF ++ ++T +GQ LD +T + D FT R +
Sbjct: 215 REQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFY 274
Query: 490 LPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKC 311
LP++ + +A EK + +A+ I LE+G FQIQDD++D FGD TGK+GTDIQ+ KC
Sbjct: 275 LPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKC 334
Query: 310 TWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIR 131
+WL VQ LQR T Q + K YG E V R+K LYE+L LP ++ E+ Y +I+
Sbjct: 335 SWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIMA 394
Query: 130 QIENIPIEAARVLFKKLLDITYNRQ 56
IE +F L Y R+
Sbjct: 395 LIEQYAAPLPPAVFLGLARKIYKRR 419
>BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 195 bits (475), Expect = 2e-49
Identities = 102/265 (38%), Positives = 145/265 (54%), Gaps = 1/265 (0%)
Frame = -1
Query: 847 GMVCRMFQAYCXVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNF 668
G + QA+ V DDIMD S RRG CWY++P VG+ A ND+ L+ + ++ LK
Sbjct: 155 GWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLKLYC 213
Query: 667 RTNPNYMKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXYN 491
R P Y+ + ELF ++ ++T +GQ LD +T + D FT R +
Sbjct: 214 REQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFY 273
Query: 490 LPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKC 311
LP++ + +A EK + +A+ I LE+G FQIQDD++D FGD TGK+GTDIQ+ KC
Sbjct: 274 LPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKC 333
Query: 310 TWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIR 131
+WL VQ LQR T Q + K YG E V R+K LYE+L LP ++ E+ Y +I+
Sbjct: 334 SWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIMA 393
Query: 130 QIENIPIEAARVLFKKLLDITYNRQ 56
IE +F L Y R+
Sbjct: 394 LIEQYAAPLPPAVFLGLARKIYKRR 418
>AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 195 bits (475), Expect = 2e-49
Identities = 102/265 (38%), Positives = 145/265 (54%), Gaps = 1/265 (0%)
Frame = -1
Query: 847 GMVCRMFQAYCXVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNF 668
G + QA+ V DDIMD S RRG CWY++P VG+ A ND+ L+ + ++ LK
Sbjct: 155 GWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLKLYC 213
Query: 667 RTNPNYMKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXYN 491
R P Y+ + ELF ++ ++T +GQ LD +T + D FT R +
Sbjct: 214 REQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFY 273
Query: 490 LPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKC 311
LP++ + +A EK + +A+ I LE+G FQIQDD++D FGD TGK+GTDIQ+ KC
Sbjct: 274 LPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKC 333
Query: 310 TWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIR 131
+WL VQ LQR T Q + K YG E V R+K LYE+L LP ++ E+ Y +I+
Sbjct: 334 SWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIMA 393
Query: 130 QIENIPIEAARVLFKKLLDITYNRQ 56
IE +F L Y R+
Sbjct: 394 LIEQYAAPLPPAVFLGLARKIYKRR 418
>Z47055-1|CAA87327.1| 348|Homo sapiens farnesyl pyrophosphate
synthetase like-4 protein.
Length = 348
Score = 177 bits (431), Expect = 4e-44
Identities = 97/264 (36%), Positives = 136/264 (51%), Gaps = 1/264 (0%)
Frame = -1
Query: 847 GMVCRMFQAYCXVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNF 668
G + QA+ V DDIMD S RRG CWY++P VG+ A +D+ L+ + ++ LK
Sbjct: 84 GWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AIDDANLLEACIYPLLKLYC 142
Query: 667 RTNPNYMKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXYN 491
R P Y+ + ELF ++ ++T +GQ LD +T + D FT R
Sbjct: 143 REQPYYLNLIELFLQSSYQTEIGQTLDLLTXPQGNVDLVRFTEKRYISIVKYKTALSSSY 202
Query: 490 LPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKC 311
LP++ V EK + +A I LE+G QIQDD+++ FGD TGK+GTDIQ+ KC
Sbjct: 203 LPIAAAXXXXGIVXEKEHANAXKILLEMGEFSQIQDDYLELFGDPSVTGKIGTDIQDXKC 262
Query: 310 TWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIR 131
L VQ L R T Q + K YG E V R+K LYE+L LP ++ E+ Y +I+
Sbjct: 263 NCLXVQCLXRATPEQYQILKENYGQKEAEKVPRVKALYEELDLPAVFLQYEEDSYSHIMA 322
Query: 130 QIENIPIEAARVLFKKLLDITYNR 59
IE +F L Y R
Sbjct: 323 LIEQYAAPLPPAVFLGLARQIYKR 346
>BC050292-1|AAH50292.1| 298|Homo sapiens LOC619190 protein protein.
Length = 298
Score = 164 bits (398), Expect = 4e-40
Identities = 87/243 (35%), Positives = 131/243 (53%), Gaps = 1/243 (0%)
Frame = -1
Query: 847 GMVCRMFQAYCXVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNF 668
G ++ QA+ V DDIMD S +G WY++ +G+ A ND++L+ + ++ LK
Sbjct: 57 GWYAQLLQAFFLVADDIMDSSLTCQGQISWYQKLGMGLD-AINDAILLEACIYCLLKLYC 115
Query: 667 RTNPNYMKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXYN 491
R P Y+ + ELF + ++T +GQ LD +T + D T R +
Sbjct: 116 REQPYYLNLMELFQQNSYQTEIGQTLDLITTPQGNVDLRRCTEKRHKSVVKYKTAFYSFY 175
Query: 490 LPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKC 311
LPV+ + ++ D+K + SA+ I LEI FQIQDD++D GD TG+VG D Q+ KC
Sbjct: 176 LPVAAAMYMSRMDDKKEHTSAKKILLEIQEFFQIQDDYLDFSGDPSVTGRVGNDFQDNKC 235
Query: 310 TWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIR 131
+WL VQ L + T Q + K Y E V R+K LYE+L LP ++ EK Y +++
Sbjct: 236 SWLVVQCLLQATPEQYQILKENYRQKEAEKVARVKALYEELDLPAVFLQYEKDSYSHVMG 295
Query: 130 QIE 122
IE
Sbjct: 296 LIE 298
>M87434-1|AAA60607.1| 727|Homo sapiens 71 kDa 2'5' oligoadenylate
synthetase protein.
Length = 727
Score = 30.3 bits (65), Expect = 9.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 339 LVQIYKSANVLGWQFKRCSAVLKHNVQYSKP 247
L+ +YKS+++ G +F C VL+ N S+P
Sbjct: 506 LIDLYKSSDLPGGEFSTCFTVLQRNFIRSRP 536
>M87284-1|AAA60606.1| 687|Homo sapiens 2'5' oligoadenylate
synthetase protein.
Length = 687
Score = 30.3 bits (65), Expect = 9.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 339 LVQIYKSANVLGWQFKRCSAVLKHNVQYSKP 247
L+ +YKS+++ G +F C VL+ N S+P
Sbjct: 506 LIDLYKSSDLPGGEFSTCFTVLQRNFIRSRP 536
>BC049215-1|AAH49215.1| 687|Homo sapiens 2'-5'-oligoadenylate
synthetase 2, 69/71kDa protein.
Length = 687
Score = 30.3 bits (65), Expect = 9.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 339 LVQIYKSANVLGWQFKRCSAVLKHNVQYSKP 247
L+ +YKS+++ G +F C VL+ N S+P
Sbjct: 506 LIDLYKSSDLPGGEFSTCFTVLQRNFIRSRP 536
>AL365315-2|CAH71926.1| 212|Homo sapiens potassium channel
tetramerisation domain containing 3 protein.
Length = 212
Score = 30.3 bits (65), Expect = 9.3
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 843 WCVECFRHIALCWMTLWMVQASDAACPVGIGVRK-WASHA 727
W V + H A+C+ W+ A P +G R W+S +
Sbjct: 168 WIVAAYAHFAVCYRVFWLGTVGHACNPSTLGGRDGWSSRS 207
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,585,571
Number of Sequences: 237096
Number of extensions: 2563088
Number of successful extensions: 4743
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4729
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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