Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_F24
         (666 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006608-6|AAF39753.1|  308|Caenorhabditis elegans Steroid alpha...   163   8e-41
Z68116-2|CAA92173.1|  243|Caenorhabditis elegans Hypothetical pr...    54   9e-08
Z68115-3|CAA92168.1|  243|Caenorhabditis elegans Hypothetical pr...    52   3e-07
Z68222-3|CAA92499.1|  253|Caenorhabditis elegans Hypothetical pr...    41   0.001
Z71178-13|CAF31498.1|  342|Caenorhabditis elegans Hypothetical p...    34   0.079
Z71178-11|CAA94885.2|  309|Caenorhabditis elegans Hypothetical p...    34   0.079
Z70782-11|CAA94848.1|  487|Caenorhabditis elegans Hypothetical p...    25   4.6  
Z70781-9|CAA94837.1|  487|Caenorhabditis elegans Hypothetical pr...    25   4.6  
Z48544-9|CAA88436.2|  250|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z81475-8|CAL90887.1|  676|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z81475-7|CAB03914.2|  653|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>AC006608-6|AAF39753.1|  308|Caenorhabditis elegans Steroid alpha
           reductase familyprotein 1 protein.
          Length = 308

 Score =  163 bits (397), Expect = 8e-41
 Identities = 71/96 (73%), Positives = 79/96 (82%)
 Frame = -3

Query: 664 GNLSIHILXKNLRPPGTKIRRIPKPDGNPFSLLLNFVSCPNYTYEFGSWLFFTIMTKCAP 485
           GNLSIHIL +NLRP GT+ RRIPKPDGNP SLL N+VSCPNYTYE  SW+FF+IM +  P
Sbjct: 207 GNLSIHILLRNLRPAGTRERRIPKPDGNPLSLLFNYVSCPNYTYEVASWIFFSIMVQSLP 266

Query: 484 AGLFAAAGFYQMAVWAIGKHRNYKKEFPDYPKGRKA 377
           A +F  AGF QMA+WA GKHRNY KEFPDYPK RKA
Sbjct: 267 AIIFTTAGFAQMAIWAQGKHRNYLKEFPDYPKNRKA 302


>Z68116-2|CAA92173.1|  243|Caenorhabditis elegans Hypothetical
           protein F42F12.3 protein.
          Length = 243

 Score = 54.0 bits (124), Expect = 9e-08
 Identities = 26/68 (38%), Positives = 35/68 (51%)
 Frame = -3

Query: 580 PFSLLLNFVSCPNYTYEFGSWLFFTIMTKCAPAGLFAAAGFYQMAVWAIGKHRNYKKEFP 401
           P   L  ++SCPNY  E   W+ + I+    PA  FA   F  +   AI  H  YK++FP
Sbjct: 170 PTGFLYEYISCPNYFGEIMEWIGYAILGWNLPALAFAIFTFANIGPRAIAHHNWYKEKFP 229

Query: 400 DYPKGRKA 377
            YP  R+A
Sbjct: 230 KYPPTRRA 237


>Z68115-3|CAA92168.1|  243|Caenorhabditis elegans Hypothetical
           protein F19H6.4 protein.
          Length = 243

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 23/67 (34%), Positives = 34/67 (50%)
 Frame = -3

Query: 580 PFSLLLNFVSCPNYTYEFGSWLFFTIMTKCAPAGLFAAAGFYQMAVWAIGKHRNYKKEFP 401
           P   L  ++SCPNY  E   W+ ++I+    PA  FA      +   A+  H+ YK+ FP
Sbjct: 170 PTGFLYEYISCPNYAGEIMEWIGYSILAWNLPALAFAIFTIANIGPRAVAHHKWYKETFP 229

Query: 400 DYPKGRK 380
            YP  R+
Sbjct: 230 GYPPNRR 236


>Z68222-3|CAA92499.1|  253|Caenorhabditis elegans Hypothetical
           protein ZK1251.3 protein.
          Length = 253

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = -3

Query: 559 FVSCPNYTYEFGSWLFFTIMTKCAPAGLFAAAGFYQMAVWAIGKHRNYKKEFPD-YPKGR 383
           ++SCPNY  E   W+ + +  +  PA  FA      +A  A+  H+ Y+K F + YP+ R
Sbjct: 186 YISCPNYFGECLQWIGYALAARSFPAIAFAFFIVCNLAPRAMSHHKWYQKMFGEQYPRDR 245

Query: 382 KA 377
            A
Sbjct: 246 HA 247


>Z71178-13|CAF31498.1|  342|Caenorhabditis elegans Hypothetical
           protein B0024.13b protein.
          Length = 342

 Score = 34.3 bits (75), Expect = 0.079
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = -3

Query: 562 NFVSCPNYTYEFGSWL-FFTIMTKCAPAGLFAAAGFYQMAVWAIGKHRNYKKEFPDYPKG 386
           N VSCP++ +E   +L  F ++                    A+  H  Y K FP YPK 
Sbjct: 274 NLVSCPHFLFEICIYLSLFLVIPDAYVYRFIIMFVCINQTFAALITHSWYHKTFPKYPKS 333

Query: 385 RKA 377
           RKA
Sbjct: 334 RKA 336


>Z71178-11|CAA94885.2|  309|Caenorhabditis elegans Hypothetical
           protein B0024.13a protein.
          Length = 309

 Score = 34.3 bits (75), Expect = 0.079
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = -3

Query: 562 NFVSCPNYTYEFGSWL-FFTIMTKCAPAGLFAAAGFYQMAVWAIGKHRNYKKEFPDYPKG 386
           N VSCP++ +E   +L  F ++                    A+  H  Y K FP YPK 
Sbjct: 241 NLVSCPHFLFEICIYLSLFLVIPDAYVYRFIIMFVCINQTFAALITHSWYHKTFPKYPKS 300

Query: 385 RKA 377
           RKA
Sbjct: 301 RKA 303


>Z70782-11|CAA94848.1|  487|Caenorhabditis elegans Hypothetical
           protein F57A8.7 protein.
          Length = 487

 Score = 24.6 bits (51), Expect(2) = 4.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 179 LPSNMSSDTHQGTNQYLFDISKLSMSIF 262
           L S + +   QGT Q L+DIS  +  IF
Sbjct: 392 LYSKLLNPDSQGTQQSLYDISNTTARIF 419



 Score = 22.2 bits (45), Expect(2) = 4.6
 Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 2/20 (10%)
 Frame = +2

Query: 380 FTAFGV--VWEFLLVVAMFT 433
           +T +G   VWEFL ++ +FT
Sbjct: 428 YTVYGPRRVWEFLCLLLLFT 447


>Z70781-9|CAA94837.1|  487|Caenorhabditis elegans Hypothetical
           protein F57A8.7 protein.
          Length = 487

 Score = 24.6 bits (51), Expect(2) = 4.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 179 LPSNMSSDTHQGTNQYLFDISKLSMSIF 262
           L S + +   QGT Q L+DIS  +  IF
Sbjct: 392 LYSKLLNPDSQGTQQSLYDISNTTARIF 419



 Score = 22.2 bits (45), Expect(2) = 4.6
 Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 2/20 (10%)
 Frame = +2

Query: 380 FTAFGV--VWEFLLVVAMFT 433
           +T +G   VWEFL ++ +FT
Sbjct: 428 YTVYGPRRVWEFLCLLLLFT 447


>Z48544-9|CAA88436.2|  250|Caenorhabditis elegans Hypothetical
           protein ZK945.2 protein.
          Length = 250

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
 Frame = -3

Query: 529 FGSWLFFTIMTKCAPAGLFAA--AGF-YQMAVWAIGKHRNYKK 410
           FG+  FF    K     LF    +G  Y+   WA+GKHR   K
Sbjct: 131 FGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAK 173


>Z81475-8|CAL90887.1|  676|Caenorhabditis elegans Hypothetical
           protein C24H11.8b protein.
          Length = 676

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -1

Query: 237 ISNRYWLVPWWVSDDILEGSGFCLFWYATVWCGN 136
           IS   WL  WW + +  +G+ +C    +T+  G+
Sbjct: 505 ISGGAWLFSWWENWNGFDGAYYCFITLSTIGFGD 538


>Z81475-7|CAB03914.2|  653|Caenorhabditis elegans Hypothetical
           protein C24H11.8a protein.
          Length = 653

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -1

Query: 237 ISNRYWLVPWWVSDDILEGSGFCLFWYATVWCGN 136
           IS   WL  WW + +  +G+ +C    +T+  G+
Sbjct: 505 ISGGAWLFSWWENWNGFDGAYYCFITLSTIGFGD 538


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,130,825
Number of Sequences: 27780
Number of extensions: 331826
Number of successful extensions: 830
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)