Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_F22
(368 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14429-8|AAA28214.1| 94|Caenorhabditis elegans Hypothetical pr... 153 3e-38
AF303260-1|AAG50218.1| 94|Caenorhabditis elegans 3H949 protein. 153 3e-38
AL132898-4|CAC14407.3| 968|Caenorhabditis elegans Hypothetical ... 29 1.4
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 28 1.8
Z75531-4|CAA99805.1| 408|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z98851-2|CAB11536.1| 324|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr... 26 9.7
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein. 26 9.7
AF025453-6|AAM98051.1| 288|Caenorhabditis elegans Hypothetical ... 26 9.7
>L14429-8|AAA28214.1| 94|Caenorhabditis elegans Hypothetical
protein ZK652.3 protein.
Length = 94
Score = 153 bits (372), Expect = 3e-38
Identities = 72/82 (87%), Positives = 78/82 (95%)
Frame = -3
Query: 249 SKVTFKITLTSDPKLPFKVLSVPEATPFTAVLKFAAEEFRVDPATSAIITDDGIGINPQQ 70
SKVTFKITLTSDPKLPFKVLSVPE+TPFTAVLKFAAEEF+V ATSAIIT+DG+G+NP Q
Sbjct: 12 SKVTFKITLTSDPKLPFKVLSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGVGVNPAQ 71
Query: 69 TAGNVFLKHGSELRLIPRDRVG 4
AGN+FLKHGSELRLIPRDRVG
Sbjct: 72 PAGNIFLKHGSELRLIPRDRVG 93
>AF303260-1|AAG50218.1| 94|Caenorhabditis elegans 3H949 protein.
Length = 94
Score = 153 bits (372), Expect = 3e-38
Identities = 72/82 (87%), Positives = 78/82 (95%)
Frame = -3
Query: 249 SKVTFKITLTSDPKLPFKVLSVPEATPFTAVLKFAAEEFRVDPATSAIITDDGIGINPQQ 70
SKVTFKITLTSDPKLPFKVLSVPE+TPFTAVLKFAAEEF+V ATSAIIT+DG+G+NP Q
Sbjct: 12 SKVTFKITLTSDPKLPFKVLSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGVGVNPAQ 71
Query: 69 TAGNVFLKHGSELRLIPRDRVG 4
AGN+FLKHGSELRLIPRDRVG
Sbjct: 72 PAGNIFLKHGSELRLIPRDRVG 93
>AL132898-4|CAC14407.3| 968|Caenorhabditis elegans Hypothetical
protein Y59A8B.6 protein.
Length = 968
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 80 FMPIPSSVIIALVAGSTLNSSAANFNTAVNGVASGTLSTLNGSFGS 217
F P+P S+I + ++ S + N ASG +STL G G+
Sbjct: 192 FTPVPDSIIAMNMNYGQMSHSIDSGNGLTTPFASGFMSTLGGGGGA 237
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 28.3 bits (60), Expect = 1.8
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -3
Query: 252 MSKVTFKITLTSDPKLPFKVLSVPEATPFTAVLKFAAEEF 133
++K T K+ L++ P+ VL P FT ++KF EEF
Sbjct: 132 ITKKTTKLHLSASPQTGHAVLPYP----FTGIIKFQTEEF 167
>Z75531-4|CAA99805.1| 408|Caenorhabditis elegans Hypothetical
protein C54D10.4 protein.
Length = 408
Score = 27.5 bits (58), Expect = 3.2
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 178 FRHAKYFKRQFRIRC-ECNLESYFRHFKLYTNLKIYVQFRFPIYY 309
FR YFK+ F+I+C + ES K+ T L ++V + I +
Sbjct: 81 FRKNDYFKKLFKIKCISKSTESNSMKMKIRTVLLVFVFIKLCILF 125
>Z98851-2|CAB11536.1| 324|Caenorhabditis elegans Hypothetical
protein H12I19.2 protein.
Length = 324
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 361 IDLIYLYYCVRHFSFVICNKLGNEIEHK 278
+ IY + V+ F F++C ++GN I K
Sbjct: 153 VKYIYALFIVKDFIFLLCLEIGNSIGSK 180
>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 25.8 bits (54), Expect = 9.7
Identities = 14/63 (22%), Positives = 22/63 (34%)
Frame = +1
Query: 88 DTVISDNSTGGRVHPEFFSCKLQHCSEWSRFRHAKYFKRQFRIRCECNLESYFRHFKLYT 267
+T++ ++ + F L H S K K + I S RH K Y
Sbjct: 1110 ETLVLESQLSSQTEENIFVQDLMHTDPMSELYQRKVSKARSAIENASTARSIVRHLKQYD 1169
Query: 268 NLK 276
+K
Sbjct: 1170 GMK 1172
>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 25.8 bits (54), Expect = 9.7
Identities = 14/63 (22%), Positives = 22/63 (34%)
Frame = +1
Query: 88 DTVISDNSTGGRVHPEFFSCKLQHCSEWSRFRHAKYFKRQFRIRCECNLESYFRHFKLYT 267
+T++ ++ + F L H S K K + I S RH K Y
Sbjct: 1110 ETLVLESQLSSQTEENIFVQDLMHTDPMSELYQRKVSKARSAIENASTARSIVRHLKQYD 1169
Query: 268 NLK 276
+K
Sbjct: 1170 GMK 1172
>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
Length = 2084
Score = 25.8 bits (54), Expect = 9.7
Identities = 14/63 (22%), Positives = 22/63 (34%)
Frame = +1
Query: 88 DTVISDNSTGGRVHPEFFSCKLQHCSEWSRFRHAKYFKRQFRIRCECNLESYFRHFKLYT 267
+T++ ++ + F L H S K K + I S RH K Y
Sbjct: 1113 ETLVLESQLSSQTEENIFVQDLMHTDPMSELYQRKVSKARSAIENASTARSIVRHLKQYD 1172
Query: 268 NLK 276
+K
Sbjct: 1173 GMK 1175
>AF025453-6|AAM98051.1| 288|Caenorhabditis elegans Hypothetical
protein C08F1.10 protein.
Length = 288
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 253 FKLYTNLKIYVQFRFPIYYKL 315
F LY L++ ++ FPI+Y+L
Sbjct: 149 FLLYKTLRLLLETEFPIHYRL 169
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,266,087
Number of Sequences: 27780
Number of extensions: 162988
Number of successful extensions: 408
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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