Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_F19
         (803 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    31   0.013
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   2.5  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   3.3  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   5.8  

>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 31.1 bits (67), Expect = 0.013
 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
 Frame = -1

Query: 536 KDTPGFVVNRILAPYSAEALRMYERGDATKEDIDIGLKLGAGFP---MGPFELADYTGLD 366
           ++  GFV+NRI      EA R+   G    +D+D  +  G G     +G FE A      
Sbjct: 3   REIDGFVLNRIQYAILNEAWRLVADGILNAKDVDAVMSEGLGMRYAFLGAFEAAHLNAEG 62

Query: 365 TNKFVLQVMHEM-TKHPVFEPIPLLDKMVAE 276
             K+     + +      F P+P  +  +AE
Sbjct: 63  MKKYCETYKNSIYDVSMTFGPVPKFEGEMAE 93


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +1

Query: 637 ITGTGLKKWRPPNLSFL-LMPEPIAFTD 717
           IT TGL+ WR  N ++  L+P  + F +
Sbjct: 8   ITTTGLENWRVNNSNYTELLPIDMRFNE 35


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 385 ANSNGPIGNPAPNFRP 432
           AN+N P+G+P+   +P
Sbjct: 90  ANANSPVGSPSAALQP 105


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 235 SAEDIDTAMRLGAGYPMGP 179
           S +DI+T +R  + YP+ P
Sbjct: 109 SRQDIETIIRRNSRYPLRP 127


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,085
Number of Sequences: 438
Number of extensions: 6125
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)