Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_F17
(801 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical pr... 307 7e-84
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 36 0.034
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical p... 28 6.8
Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical pr... 28 6.8
AC024859-12|AAK29966.1| 477|Caenorhabditis elegans Hypothetical... 28 6.8
Z99281-24|CAE18027.1| 155|Caenorhabditis elegans Hypothetical p... 28 8.9
>Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical
protein B0250.1 protein.
Length = 260
Score = 307 bits (753), Expect = 7e-84
Identities = 133/192 (69%), Positives = 163/192 (84%)
Frame = -1
Query: 765 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 586
MGR IR QRKGAG +F SH K RKGA KLR LDYAERHGYIKG+VKDIIHDPGRGAPLA+
Sbjct: 1 MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAI 60
Query: 585 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 406
+ FRDPYK+KT K +A EG++TGQF++CG KA +++GN++PVG +PEGT +CN+E K
Sbjct: 61 IAFRDPYKYKTVKTTVVAAEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKS 120
Query: 405 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 226
GDRG +ARASGN+ATVI HNPD K+TR++LPSGAKKV+ S NR M+G+VAGGGR DKP+L
Sbjct: 121 GDRGVIARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLL 180
Query: 225 KAGRAYHKXQGQ 190
KAGR+YHK + +
Sbjct: 181 KAGRSYHKYKAK 192
Score = 87.0 bits (206), Expect = 1e-17
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = -2
Query: 197 KVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 60
K KRN WP VRGVAMNPVEHPHGGGNHQHIG STV+R SAG+KV
Sbjct: 190 KAKRNSWPRVRGVAMNPVEHPHGGGNHQHIGHPSTVRRDASAGKKV 235
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 35.9 bits (79), Expect = 0.034
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -1
Query: 471 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 313
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical
protein C01F4.2a protein.
Length = 986
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = -2
Query: 251 VDVLTNLF*KLEGHTTSXKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 72
+D + N K++ H + V + +P +P H HG +H HIG+ S + R +
Sbjct: 740 LDRILNHLSKMDSHESHPGVLLSPFPATLEEDSSPRHHRHG--DHSHIGRQSPLARELTT 797
Query: 71 GRKV 60
KV
Sbjct: 798 NGKV 801
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 765 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAER 655
+GR R+ +KG F +HT K L+ LD A++
Sbjct: 464 IGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQ 500
>Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 654 HGYIKGVVKDIIHDPGRGAPLAVVHFR 574
HG + +V I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311
>Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 654 HGYIKGVVKDIIHDPGRGAPLAVVHFR 574
HG + +V I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311
>Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical
protein T24B8.1 protein.
Length = 134
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 357 IGHNPDAKRTRVKLPSGAKKVL 292
IGH D +RTR LP+G KKVL
Sbjct: 57 IGHGSD-RRTRFVLPNGYKKVL 77
>AC024859-12|AAK29966.1| 477|Caenorhabditis elegans Hypothetical
protein Y71H2AM.16 protein.
Length = 477
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 157 ATPRTYGQQLRLTLXLVVCPSSFQNRFVNTSTSSNNTDH 273
++P + ++LRL V+CP FV+T SN +H
Sbjct: 388 SSPESAPRELRLPGCDVLCPMETYQEFVSTRIISNKEEH 426
>Z99281-24|CAE18027.1| 155|Caenorhabditis elegans Hypothetical
protein Y57G11C.44 protein.
Length = 155
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -1
Query: 717 VSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 592
+S ++RK + LD+++ G K ++KDI +D + P+
Sbjct: 1 MSEVRQRKSSIIDSDLDFSDSDGEFKEIIKDIENDQWKDKPV 42
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,550,814
Number of Sequences: 27780
Number of extensions: 449459
Number of successful extensions: 1153
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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