Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_F16
         (700 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39645-3|AAA80362.3|  439|Caenorhabditis elegans Gustatory recep...    30   1.4  
AF387605-1|AAK70488.1|  427|Caenorhabditis elegans putative chem...    30   1.4  
AL033536-6|CAK55187.1|  162|Caenorhabditis elegans Hypothetical ...    29   3.2  
AC006816-6|ABA00154.1|  506|Caenorhabditis elegans Hypothetical ...    29   4.2  
Z82052-6|CAB04829.4|  327|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z99281-23|CAE18026.1|  302|Caenorhabditis elegans Hypothetical p...    27   9.8  

>U39645-3|AAA80362.3|  439|Caenorhabditis elegans Gustatory receptor
           family protein 2 protein.
          Length = 439

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = +3

Query: 324 HIPKATKSICGLFSLNKNFVRSMIVAVASFFVFSLPFDVIGDSS 455
           H  K T S C  F ++++ + S+  A+ ++F+    FD+  + S
Sbjct: 385 HSTKLTLSACNYFYMDRSILLSLFSAILTYFLILWEFDIKNNQS 428


>AF387605-1|AAK70488.1|  427|Caenorhabditis elegans putative
           chemoreceptor GUR-2 protein.
          Length = 427

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = +3

Query: 324 HIPKATKSICGLFSLNKNFVRSMIVAVASFFVFSLPFDVIGDSS 455
           H  K T S C  F ++++ + S+  A+ ++F+    FD+  + S
Sbjct: 373 HSTKLTLSACNYFYMDRSILLSLFSAILTYFLILWEFDIKNNQS 416


>AL033536-6|CAK55187.1|  162|Caenorhabditis elegans Hypothetical
           protein Y53C10A.15 protein.
          Length = 162

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +3

Query: 330 PKATKSICGLFSLNKNFVRSMIVAVASFFVFSLPFD 437
           PK TK  CG    +K+ + ++++  + +FVF+ PFD
Sbjct: 20  PKPTK--CGTIDDDKSKIPNLLMEPSKYFVFNGPFD 53


>AC006816-6|ABA00154.1|  506|Caenorhabditis elegans Hypothetical
           protein Y71D11A.1 protein.
          Length = 506

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = -1

Query: 484 PLDPTNYTFVEESPITSNGSE---KTKNEATATIIDRTKFLFKLNKPQIDLVAFGIWGRL 314
           P+  T    + +S +T +  E   + K    + I  + K   +  +P+ID VAFG   R 
Sbjct: 299 PITTTYSEDIIDSEVTKSPQELIAELKKALKSEISGKPKIFKEAEEPEIDFVAFGTKNR- 357

Query: 313 FLNDFDHSNNE 281
            +N  D  N+E
Sbjct: 358 EMNAIDTENSE 368


>Z82052-6|CAB04829.4|  327|Caenorhabditis elegans Hypothetical
           protein T25E12.11 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +3

Query: 492 FTLTEIGRYSILSHCNVSLYVFLNVVIS-MTKF 587
           + L    +  I   CN  LY+FLNVVIS +T F
Sbjct: 173 YCLLSTEKVQIFIACNEVLYMFLNVVISFLTPF 205


>Z99281-23|CAE18026.1|  302|Caenorhabditis elegans Hypothetical
           protein Y57G11C.43 protein.
          Length = 302

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = -1

Query: 433 NGSEKTKNEATATI-IDRTKFLFKLNKPQIDLV 338
           NG+E T+N++T T+ +  T FL +L++   D+V
Sbjct: 196 NGTELTENQSTQTVPLAPTNFLHELDRSTQDVV 228


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,161,922
Number of Sequences: 27780
Number of extensions: 208649
Number of successful extensions: 527
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)